Conservation of cofitness between ABZR87_RS01855 and ABZR87_RS03455 in Ralstonia sp. UNC404CL21Col

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01855 A24 family peptidase 1.0 ABZR87_RS03455 type II secretion system ATPase GspE 0.72 3
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS06190 prepilin peptidase 0.92 RALBFv3_RS07745 type II secretion system protein GspE 0.80 1
Ralstonia solanacearum UW163 0.86 UW163_RS07435 prepilin peptidase 0.92 UW163_RS05880 type II secretion system protein GspE — —
Ralstonia solanacearum GMI1000 0.83 RS_RS14140 prepilin peptidase 0.90 RS_RS15645 type II secretion system protein GspE 0.46 10
Ralstonia solanacearum PSI07 0.83 RPSI07_RS11050 prepilin peptidase 0.92 RPSI07_RS09515 type II secretion system protein GspE 0.56 11
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS17990 methyltransferase 0.76 RR42_RS19525 general secretion pathway protein GspE 0.87 8
Pseudomonas sp. S08-1 0.48 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase 0.47 OH686_04390 type II secretion system protein E 0.63 62
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.46 PfGW456L13_265 General secretion pathway protein E low > 87
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27315 A24 family peptidase 0.69 QEN71_RS29515 type II secretion system ATPase GspE low > 153
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12285 prepilin peptidase 0.49 CSW01_13785 type II secretion system protein GspE — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS03940 prepilin peptidase 0.58 PFLU_RS11895 type II secretion system ATPase GspE low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS03940 prepilin peptidase 0.58 PFLU_RS11895 type II secretion system ATPase GspE — —
Pseudomonas putida KT2440 0.45 PP_0632 leader peptidase/N-methyltransferase 0.44 PP_1047 putative protein secretion protein for export low > 96
Pseudomonas stutzeri RCH2 0.45 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.47 Psest_4202 general secretory pathway protein E low > 67
Pseudomonas simiae WCS417 0.44 PS417_03895 methyltransferase 0.58 PS417_11300 general secretion pathway protein GspE low > 88
Shewanella sp. ANA-3 0.44 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) 0.51 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) 0.82 5
Shewanella oneidensis MR-1 0.43 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) 0.51 SO0167 gspE general secretion pathway protein E (NCBI ptt file) 0.85 5
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.55 GFF1391 General secretion pathway protein E low > 90
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS17155 peptidase A24 0.69 BPHYT_RS19600 general secretion pathway protein E 0.44 5
Marinobacter adhaerens HP15 0.43 HP15_2411 type IV pilus prepilin peptidase PilD 0.49 HP15_1602 type II secretion system protein E 0.78 2
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A 0.50 B158DRAFT_0690 general secretory pathway protein E — —
Shewanella amazonensis SB2B 0.43 Sama_0367 prepilin peptidase (RefSeq) 0.51 Sama_0170 general secretion pathway protein E (RefSeq) 0.77 3
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase 0.69 H281DRAFT_02355 type II secretion system protein E (GspE) 0.52 8
Acidovorax sp. GW101-3H11 0.42 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.55 Ac3H11_2029 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16005 methyltransferase 0.57 AO356_24795 type II secretion system protein GspE low > 104
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14320 methyltransferase 0.47 AO353_12550 type II secretion system protein GspE low > 101
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.57 Pf6N2E2_652 General secretion pathway protein E low > 103
Pseudomonas sp. RS175 0.41 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.57 PFR28_01751 putative type II secretion system protein HxcR low > 88
Shewanella loihica PV-4 0.40 Shew_3440 prepilin peptidase (RefSeq) 0.50 Shew_3618 general secretory pathway protein E (RefSeq) 0.56 40
Dickeya dadantii 3937 0.39 DDA3937_RS14750 prepilin peptidase 0.49 DDA3937_RS14795 type II secretion system ATPase GspE 0.49 12
Alteromonas macleodii MIT1002 0.38 MIT1002_03011 Pectic enzymes secretion protein OutO 0.48 MIT1002_03977 Type II traffic warden ATPase — —
Variovorax sp. SCN45 0.38 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.55 GFF5234 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) low > 127
Dickeya dianthicola 67-19 0.38 HGI48_RS14685 prepilin peptidase 0.49 HGI48_RS14730 type II secretion system ATPase GspE low > 71
Acinetobacter radioresistens SK82 0.38 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.48 MPMX26_00578 Type II secretion system protein E low > 36
Pectobacterium carotovorum WPP14 0.38 HER17_RS06740 A24 family peptidase 0.45 HER17_RS06690 type II secretion system ATPase GspE low > 75
Variovorax sp. OAS795 0.38 ABID97_RS23440 A24 family peptidase 0.56 ABID97_RS06945 ATPase, T2SS/T4P/T4SS family low > 91
Dickeya dianthicola ME23 0.37 DZA65_RS15630 prepilin peptidase 0.49 DZA65_RS15675 type II secretion system ATPase GspE low > 75
Klebsiella michiganensis M5al 0.35 BWI76_RS05035 prepilin peptidase 0.48 BWI76_RS05085 general secretion pathway protein GspE — —
Rahnella sp. WP5 0.35 EX31_RS16215 prepilin peptidase 0.46 EX31_RS16170 type II secretion system ATPase GspE low > 89
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.41 Xcc-8004.943.1 General secretion pathway protein E — —
Enterobacter sp. TBS_079 0.32 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.46 MPMX20_01516 Putative type II secretion system protein E low > 85
Escherichia coli ECRC100 0.31 OKFHMN_00235 pulO prepilin peptidase 0.48 OKFHMN_00280 gspE type II secretion system ATPase GspE low > 80
Escherichia coli ECRC101 0.31 MCAODC_15315 pulO prepilin peptidase 0.48 MCAODC_15270 gspE type II secretion system ATPase GspE low > 87
Escherichia coli ECRC98 0.31 JDDGAC_30345 pulO prepilin peptidase 0.48 JDDGAC_30300 gspE type II secretion system ATPase GspE low > 86
Escherichia coli ECRC102 0.31 NIAGMN_28555 pulO prepilin peptidase 0.48 NIAGMN_28600 gspE type II secretion system ATPase GspE — —
Erwinia tracheiphila SCR3 0.31 LU632_RS25275 A24 family peptidase 0.45 LU632_RS25235 gspE type II secretion system ATPase GspE low > 74
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.47 EX28DRAFT_2078 type II secretion system protein E low > 76
Escherichia coli Nissle 1917 0.27 ECOLIN_RS17100 prepilin peptidase PppA 0.45 ECOLIN_RS19065 type II secretion system ATPase GspE low > 55
Escherichia coli ECOR38 0.27 HEPCGN_18035 pppA prepilin peptidase PppA 0.46 HEPCGN_18055 gspE general secretion pathway protein E 0.93 3
Escherichia coli BL21 0.27 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.46 ECD_02837 putative type II secretion protein GspE 0.92 6
Escherichia fergusonii Becca 0.27 EFB2_00842 Prepilin peptidase PppA 0.46 EFB2_00846 Type II secretion system protein E low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00736 Leader peptidase PppA 0.45 OHPLBJKB_00377 Putative type II secretion system protein E low > 73
Escherichia coli BW25113 0.26 b2972 b2972 putative peptidase (VIMSS) 0.45 b3326 gspE general secretory pathway component, cryptic (NCBI) low > 76

Not shown: 16 genomes with orthologs for ABZR87_RS01855 only; 4 genomes with orthologs for ABZR87_RS03455 only