Conservation of cofitness between A4249_RS13050 and A4249_RS08775 in Brevundimonas sp. GW460-12-10-14-LB2

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS13050 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 1.0 A4249_RS08775 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.75 2
Caulobacter crescentus NA1000 Δfur 0.67 CCNA_00846 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 0.69 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 67
Caulobacter crescentus NA1000 0.67 CCNA_00846 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 0.69 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 66
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS12940 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.38 ABZR86_RS09545 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 74
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4848.1 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) 0.40 Xcc-8004.2167.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_16505 putA bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.40 OKGIIK_10005 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 52
Lysobacter sp. OAE881 0.47 ABIE51_RS19215 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.40 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 62
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS07135 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.40 LRK54_RS03135 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06875 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.41 LRK55_RS02885 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 63
Shewanella oneidensis MR-1 0.46 SO3774 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) (from data) 0.40 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.46 Sama_2676 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.40 Sama_2194 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) low > 62
Shewanella sp. ANA-3 0.46 Shewana3_0819 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.40 Shewana3_1434 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) low > 73
Shewanella loihica PV-4 0.45 Shew_0615 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) 0.41 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0840 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.40 B158DRAFT_2515 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 40
Variovorax sp. SCN45 0.42 GFF5175 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) 0.36 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) low > 127
Pseudomonas stutzeri RCH2 0.42 Psest_3079 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.41 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 67
Bosea sp. OAE506 0.42 ABIE41_RS07915 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.65 ABIE41_RS17830 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 77
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2850 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.39 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 79
Paraburkholderia graminis OAS925 0.41 ABIE53_000244 RHH-type proline utilization regulon transcriptional repressor/proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase 0.35 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 113
Rhodopseudomonas palustris CGA009 0.41 TX73_008115 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.60 TX73_013480 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 86
Magnetospirillum magneticum AMB-1 0.41 AMB_RS12610 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.52 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 64
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS00905 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.42 HSERO_RS06170 S-adenosylmethionine tRNA ribosyltransferase low > 78
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_19450 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.41 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 62
Acinetobacter radioresistens SK82 0.40 MPMX26_01466 Bifunctional protein PutA 0.35 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 36
Rhodospirillum rubrum S1H 0.40 Rru_A0656 delta-1-pyrroline-5-carboxylate dehydrogenase 3 (NCBI) 0.56 Rru_A0281 Queuosine biosynthesis protein (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.39 Dshi_2311 delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) 0.50 Dshi_1180 Queuosine biosynthesis protein (RefSeq) low > 64
Marinobacter adhaerens HP15 0.39 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.40 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Agrobacterium fabrum C58 0.39 Atu4157 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.66 Atu1678 S-adenosylmethionine tRNA ribosyltransferase-isomerase low > 89
Phaeobacter inhibens DSM 17395 0.38 PGA1_c11750 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.48 PGA1_c17420 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA low > 62
Rhizobium sp. OAE497 0.38 ABIE40_RS23445 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.68 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 107
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3926 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.53 Ga0059261_1011 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 68
Variovorax sp. OAS795 0.37 ABID97_RS00240 L-glutamate gamma-semialdehyde dehydrogenase 0.38 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2726 Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.37 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 90
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU3319 putA proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (TIGR) 0.33 DVU3351 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.15 DvMF_2146 delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) 0.30 DvMF_2053 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase (RefSeq) low > 51

Not shown: 0 genomes with orthologs for A4249_RS13050 only; 65 genomes with orthologs for A4249_RS08775 only