Conservation of cofitness between Shewana3_4051 and Shewana3_3019 in Shewanella sp. ANA-3

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_4051 oligopeptidase A (RefSeq) 1.0 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.43 19
Shewanella oneidensis MR-1 0.95 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.99 SO1355 membrane protein, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.83 Shew_3657 oligopeptidase A (RefSeq) 0.84 Shew_1061 cytochrome c assembly protein (RefSeq) — —
Shewanella amazonensis SB2B 0.80 Sama_3546 oligopeptidase A (RefSeq) 0.85 Sama_0887 hypothetical protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_01010 oligopeptidase A 0.37 CSW01_02985 inner membrane protein YpjD low > 62
Serratia liquefaciens MT49 0.67 IAI46_24210 oligopeptidase A 0.37 IAI46_03910 inner membrane protein YpjD low > 86
Alteromonas macleodii MIT1002 0.67 MIT1002_03633 Oligopeptidase A 0.34 MIT1002_01295 Inner membrane protein YpjD low > 70
Dickeya dadantii 3937 0.66 DDA3937_RS21265 oligopeptidase A 0.32 DDA3937_RS16185 inner membrane protein YpjD low > 74
Pantoea sp. MT58 0.65 IAI47_01345 oligopeptidase A 0.37 IAI47_04365 inner membrane protein YpjD low > 76
Rahnella sp. WP5 0.65 EX31_RS05165 oligopeptidase A 0.36 EX31_RS07735 inner membrane protein YpjD low > 89
Enterobacter sp. TBS_079 0.65 MPMX20_04397 Oligopeptidase A 0.34 MPMX20_03481 Inner membrane protein YpjD low > 85
Dickeya dianthicola ME23 0.65 DZA65_RS00035 oligopeptidase A 0.32 DZA65_RS17390 inner membrane protein YpjD low > 75
Enterobacter asburiae PDN3 0.65 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.34 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS00045 oligopeptidase A 0.32 HGI48_RS16295 inner membrane protein YpjD low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS21300 oligopeptidase A 0.34 HER17_RS05105 inner membrane protein YpjD low > 75
Escherichia coli ECOR38 0.65 HEPCGN_15325 prlC oligopeptidase A 0.36 HEPCGN_20285 ypjD Inner membrane protein YpjD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.35 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.48 38
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00205 Oligopeptidase A 0.36 OHPLBJKB_01095 Inner membrane protein YpjD low > 73
Escherichia coli BW25113 0.65 b3498 prlC oligopeptidase A (NCBI) 0.36 b2611 ypjD predicted inner membrane protein (RefSeq) low > 76
Escherichia coli ECRC98 0.64 JDDGAC_20045 prlC oligopeptidase A 0.36 JDDGAC_24830 ypjD Inner membrane protein YpjD — —
Escherichia coli ECRC62 0.64 BNILDI_03210 prlC oligopeptidase A 0.36 BNILDI_11645 ypjD Inner membrane protein YpjD — —
Escherichia coli ECRC101 0.64 MCAODC_06930 prlC oligopeptidase A 0.36 MCAODC_11695 ypjD Inner membrane protein YpjD — —
Escherichia coli ECRC102 0.64 NIAGMN_14180 prlC oligopeptidase A 0.36 NIAGMN_18935 ypjD Inner membrane protein YpjD — —
Escherichia coli ECOR27 0.64 NOLOHH_08350 prlC oligopeptidase A 0.36 NOLOHH_12840 ypjD Inner membrane protein YpjD low > 57
Escherichia coli BL21 0.64 ECD_03347 oligopeptidase A 0.36 ECD_02500 cytochrome c assembly protein family inner membrane protein low > 60
Escherichia coli ECRC101 0.64 OKFHMN_16415 prlC oligopeptidase A 0.36 OKFHMN_21165 ypjD Inner membrane protein YpjD — —
Escherichia coli ECRC99 0.64 KEDOAH_11730 prlC oligopeptidase A 0.36 KEDOAH_07055 ypjD Inner membrane protein YpjD — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19985 oligopeptidase A 0.36 ECOLIN_RS14755 inner membrane protein YpjD low > 52
Klebsiella michiganensis M5al 0.64 BWI76_RS26610 oligopeptidase A 0.36 BWI76_RS21535 inner membrane protein YpjD 0.27 24
Escherichia fergusonii Becca 0.64 EFB2_00317 Oligopeptidase A 0.36 EFB2_01281 Inner membrane protein YpjD low > 86
Erwinia tracheiphila SCR3 0.64 LU632_RS19470 prlC oligopeptidase A 0.33 LU632_RS15675 inner membrane protein YpjD low > 74
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0457 Zn-dependent oligopeptidases 0.16 B158DRAFT_2259 ABC-type uncharacterized transport system, permease component low > 40
Pseudomonas sp. RS175 0.60 PFR28_04699 Oligopeptidase A 0.21 PFR28_00325 Inner membrane protein YpjD low > 88
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.19 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 103
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.20 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_11120 oligopeptidase A 0.19 AO356_06415 cytochrome C assembly protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_10775 oligopeptidase A 0.21 AO353_04395 cytochrome C assembly protein — —
Pseudomonas fluorescens SBW25 0.59 PFLU_RS00240 oligopeptidase A 0.20 PFLU_RS24590 cytochrome c assembly protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS00240 oligopeptidase A 0.20 PFLU_RS24590 cytochrome c assembly protein low > 109
Pseudomonas simiae WCS417 0.59 PS417_00245 oligopeptidase A 0.20 PS417_22930 cytochrome C assembly protein — —
Pseudomonas sp. S08-1 0.59 OH686_12360 Oligopeptidase A 0.20 OH686_17715 Inner membrane protein YpjD low > 80
Pseudomonas stutzeri RCH2 0.59 Psest_4320 Zn-dependent oligopeptidases 0.20 Psest_3135 ABC-type uncharacterized transport system, permease component — —
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.17 Psyr_1280 Cytochrome c assembly protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.17 Psyr_1280 Cytochrome c assembly protein low > 86
Pseudomonas putida KT2440 0.59 PP_0096 oligopeptidase A 0.21 PP_1460 putative Membrane protein low > 96
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.18 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.21 HP15_756 cytochrome c assembly protein low > 73
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS07290 oligopeptidase A 0.16 HSERO_RS01870 ABC transporter permease low > 78
Dechlorosoma suillum PS 0.50 Dsui_0046 Zn-dependent oligopeptidase 0.20 Dsui_1321 ABC-type uncharacterized transport system, permease component low > 51
Acinetobacter radioresistens SK82 0.48 MPMX26_02685 Oligopeptidase A 0.20 MPMX26_02469 Inner membrane protein YpjD low > 36
Ralstonia solanacearum GMI1000 0.46 RS_RS08035 oligopeptidase A 0.11 RS_RS14050 inner membrane protein YpjD low > 80
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.13 Ac3H11_4016 CcsA-related protein low > 79
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.14 ABID97_RS06430 cytochrome c biogenesis protein CcsA low > 91
Variovorax sp. SCN45 0.43 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.13 GFF4429 Inner membrane protein YpjD low > 127
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.13 ABCV34_RS09015 cytochrome c biogenesis protein CcsA — —

Not shown: 15 genomes with orthologs for Shewana3_4051 only; 0 genomes with orthologs for Shewana3_3019 only