Conservation of cofitness between Sama_2545 and Sama_3090 in Shewanella amazonensis SB2B

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2545 putative cell division protein BolA (RefSeq) 1.0 Sama_3090 nitrogen regulatory IIA protein (RefSeq) 0.41 5
Shewanella oneidensis MR-1 0.62 SO1099 bolA bolA protein (NCBI ptt file) 0.86 SO3963 ptsN nitrogen regulatory IIA protein (NCBI ptt file) 0.22 31
Shewanella sp. ANA-3 0.62 Shewana3_0934 transcriptional regulator BolA (RefSeq) 0.87 Shewana3_0670 PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) low > 73
Shewanella loihica PV-4 0.61 Shew_2883 BolA family protein (RefSeq) 0.86 Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) low > 60
Serratia liquefaciens MT49 0.61 IAI46_05000 transcriptional regulator BolA 0.51 IAI46_22480 PTS IIA-like nitrogen regulatory protein PtsN low > 86
Dickeya dianthicola 67-19 0.61 HGI48_RS05675 transcriptional regulator BolA 0.51 HGI48_RS01435 PTS IIA-like nitrogen regulatory protein PtsN low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS06000 transcriptional regulator BolA 0.51 DZA65_RS01500 PTS IIA-like nitrogen regulatory protein PtsN low > 75
Erwinia tracheiphila SCR3 0.60 LU632_RS18360 bolA transcriptional regulator BolA 0.47 LU632_RS21290 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Dickeya dadantii 3937 0.59 DDA3937_RS05630 transcriptional regulator BolA 0.51 DDA3937_RS01520 PTS IIA-like nitrogen regulatory protein PtsN low > 74
Rahnella sp. WP5 0.59 EX31_RS22235 transcriptional regulator BolA 0.51 EX31_RS12390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pantoea sp. MT58 0.58 IAI47_14665 transcriptional regulator BolA 0.52 IAI47_17195 PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli BL21 0.57 ECD_00386 stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC 0.50 ECD_03069 sugar-specific enzyme IIA component of PTS — —
Escherichia coli BW25113 0.57 b0435 bolA possible regulator of murein genes (VIMSS) 0.50 b3204 ptsN sugar-specific enzyme IIA component of PTS (NCBI) low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02610 transcriptional regulator BolA 0.51 ECOLIN_RS18435 PTS IIA-like nitrogen regulatory protein PtsN — —
Klebsiella michiganensis M5al 0.57 BWI76_RS06510 BolA family transcriptional regulator 0.51 BWI76_RS25275 PTS IIA-like nitrogen regulatory protein PtsN — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS15860 transcriptional regulator BolA 0.50 HER17_RS20070 PTS IIA-like nitrogen regulatory protein PtsN low > 75
Escherichia coli ECOR27 0.56 NOLOHH_01280 bolA transcriptional regulator BolA 0.50 NOLOHH_09730 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4351 Cell division protein BolA 0.50 GFF2948 PTS system nitrogen-specific IIA component, PtsN low > 78
Escherichia coli ECRC99 0.56 KEDOAH_19620 bolA transcriptional regulator BolA 0.50 KEDOAH_10220 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03238 DNA-binding transcriptional regulator BolA 0.50 OHPLBJKB_00496 Nitrogen regulatory protein low > 73
Escherichia coli ECRC101 0.56 MCAODC_27570 bolA transcriptional regulator BolA 0.50 MCAODC_08450 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC101 0.56 OKFHMN_08345 bolA transcriptional regulator BolA 0.50 OKFHMN_17930 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC102 0.56 NIAGMN_06400 bolA transcriptional regulator BolA 0.50 NIAGMN_15690 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC62 0.56 BNILDI_22695 bolA transcriptional regulator BolA 0.50 BNILDI_01805 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC98 0.56 JDDGAC_12000 bolA transcriptional regulator BolA 0.50 JDDGAC_21555 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECOR38 0.56 HEPCGN_06960 bolA transcriptional regulator BolA 0.50 HEPCGN_16805 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 85
Escherichia fergusonii Becca 0.56 EFB2_03622 DNA-binding transcriptional regulator BolA 0.51 EFB2_00619 Nitrogen regulatory protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_11680 protein BolA 0.59 CSW01_12825 PTS IIA-like nitrogen-regulatory protein PtsN — —
Enterobacter sp. TBS_079 0.55 MPMX20_01026 DNA-binding transcriptional regulator BolA 0.50 MPMX20_04110 Nitrogen regulatory protein low > 85
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2536 Stress-induced morphogen (activity unknown) 0.50 EX28DRAFT_3258 PTS IIA-like nitrogen-regulatory protein PtsN — —
Alteromonas macleodii MIT1002 0.50 MIT1002_00691 transcriptional regulator BolA 0.49 MIT1002_00825 Nitrogen regulatory protein low > 70
Marinobacter adhaerens HP15 0.48 HP15_1187 BolA-like protein 0.46 HP15_2444 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2534 Cell division protein BolA 0.42 Pf6N2E2_3269 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_03535 BolA family transcriptional regulator 0.42 AO356_07045 PTS fructose transporter subunit IIA — —
Pseudomonas sp. RS175 0.42 PFR28_00891 DNA-binding transcriptional regulator BolA 0.42 PFR28_00171 Nitrogen regulatory protein — —
Pseudomonas stutzeri RCH2 0.42 Psest_2680 transcriptional regulator, BolA protein family 0.43 Psest_3315 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_02140 BolA family transcriptional regulator 0.44 AO353_05190 PTS fructose transporter subunit IIA — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_365 Cell division protein BolA 0.42 Pf1N1B4_1082 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas sp. S08-1 0.42 OH686_21030 Cell division protein BolA 0.45 OH686_08555 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas simiae WCS417 0.42 PS417_19190 BolA family transcriptional regulator 0.43 PS417_04335 PTS fructose transporter subunit IIA — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_2162 Cell division protein BolA 0.42 PfGW456L13_5016 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas putida KT2440 0.42 PP_1757 DNA-binding transcriptional dual regulator 0.43 PP_0950 phosphotransferase system enzyme IIA, regulation of potassium transport — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS21160 BolA family transcriptional regulator 0.43 PFLU_RS04390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS21160 BolA family transcriptional regulator 0.43 PFLU_RS04390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3659 transcriptional regulator, BolA protein family 0.44 Psyr_4149 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3659 transcriptional regulator, BolA protein family 0.44 Psyr_4149 PTS IIA-like nitrogen-regulatory protein PtsN — —
Bosea sp. OAE506 0.36 ABIE41_RS07950 BolA family protein 0.39 ABIE41_RS00115 PTS IIA-like nitrogen regulatory protein PtsN — —
Rhodopseudomonas palustris CGA009 0.36 TX73_002600 BolA family transcriptional regulator 0.35 TX73_000270 PTS IIA-like nitrogen regulatory protein PtsN low > 86
Agrobacterium fabrum C58 0.35 Atu3624 stress induced morphogen 0.34 Atu0330 nitrogen regulatory IIA protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04105 BolA family transcriptional regulator 0.34 A4249_RS16085 PTS IIA-like nitrogen regulatory protein PtsN — —
Magnetospirillum magneticum AMB-1 0.33 AMB_RS19805 BolA family transcriptional regulator 0.36 AMB_RS19930 PTS IIA-like nitrogen-regulatory protein PtsN — —
Rhizobium sp. OAE497 0.33 ABIE40_RS17660 BolA family protein 0.34 ABIE40_RS01870 PTS IIA-like nitrogen regulatory protein PtsN — —
Sinorhizobium meliloti 1021 0.31 SMc00698 transcriptional regulator 0.33 SMc01141 nitrogen regulatory IIA protein — —
Azospirillum brasilense Sp245 0.29 AZOBR_RS03200 BolA family transcriptional regulator 0.34 AZOBR_RS18880 nitrogen regulatory protein — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_1274 Stress-induced morphogen (activity unknown) 0.39 Ga0059261_2190 PTS IIA-like nitrogen-regulatory protein PtsN — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS18930 BolA family transcriptional regulator 0.31 RR42_RS02075 PTS sugar transporter subunit IIA — —
Azospirillum sp. SherDot2 0.26 MPMX19_02634 DNA-binding transcriptional regulator BolA 0.33 MPMX19_02670 Nitrogen regulatory protein — —

Not shown: 5 genomes with orthologs for Sama_2545 only; 18 genomes with orthologs for Sama_3090 only