Conservation of cofitness between Shew_1668 and Shew_1669 in Shewanella loihica PV-4

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1668 methylmalonate-semialdehyde dehydrogenase (RefSeq) 1.0 Shew_1669 butyryl-CoA dehydrogenase (RefSeq) 0.85 1
Shewanella sp. ANA-3 0.87 Shewana3_2770 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) 0.92 Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) 0.94 1
Shewanella oneidensis MR-1 0.87 SO1678 mmsA methylmalonate-semialdehyde dehydrogenase (NCBI ptt file) 0.91 SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.87 1
Shewanella amazonensis SB2B 0.87 Sama_1376 methylmalonate-semialdehyde dehydrogenase (RefSeq) 0.90 Sama_1377 butyryl-CoA dehydrogenase (RefSeq) 0.70 1
Marinobacter adhaerens HP15 0.73 HP15_906 methylmalonate-semialdehyde dehydrogenase 0.69 HP15_907 acyl-CoA dehydrogenase domain protein 0.28 72
Pseudomonas sp. RS175 0.58 PFR28_00013 Methylmalonate-semialdehyde dehydrogenase [acylating] 0.41 PFR28_01883 Acyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_05990 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.41 AO353_25680 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) (from data) 0.24 59
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_5146 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.41 PfGW456L13_2983 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.33 36
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS24025 methylmalonate-semialdehyde dehydrogenase 0.38 RR42_RS00895 acyl-CoA dehydrogenase — —
Acinetobacter radioresistens SK82 0.57 MPMX26_01550 Methylmalonate-semialdehyde dehydrogenase [acylating] 0.37 MPMX26_01547 Acyl-CoA dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1229 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.41 Pf1N1B4_4787 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) low > 87
Pseudomonas simiae WCS417 0.57 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.42 PS417_13850 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.42 PFLU_RS14770 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.42 PFLU_RS14770 acyl-CoA dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.39 QEN71_RS01115 acyl-CoA dehydrogenase family protein low > 153
Pseudomonas putida KT2440 0.56 PP_4667 methylmalonate-semialdehyde dehydrogenase 0.41 PP_2216 short-chain acyl-CoA dehydrogenase low > 96
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3452 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.41 Pf6N2E2_1146 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_07870 methylmalonate-semialdehyde dehydrogenase 0.41 AO356_26355 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.26 41
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS17470 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.36 ABZR87_RS17460 acyl-CoA dehydrogenase 0.57 4
Ralstonia solanacearum GMI1000 0.56 RS_RS20230 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.35 RS_RS20240 acyl-CoA dehydrogenase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0689 methylmalonate-semialdehyde dehydrogenase (acylating) 0.34 Psyr_1769 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0689 methylmalonate-semialdehyde dehydrogenase (acylating) 0.34 Psyr_1769 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal low > 86
Variovorax sp. OAS795 0.55 ABID97_RS19425 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.68 ABID97_RS19415 acyl-CoA dehydrogenase family protein 0.40 23
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_01202 methylmalonate-semialdehyde dehydrogenase [acylating] 0.40 H281DRAFT_02091 hypothetical protein low > 103
Pseudomonas sp. S08-1 0.55 OH686_05865 methylmalonate-semialdehyde dehydrogenase (acylating) 0.66 OH686_05870 Branched-chain acyl-CoA dehydrogenase low > 80
Variovorax sp. SCN45 0.55 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.69 GFF7379 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) 0.94 13
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS28030 methylmalonate-semialdehyde dehydrogenase 0.40 BPHYT_RS02220 butyryl-CoA dehydrogenase low > 109
Ralstonia solanacearum UW163 0.54 UW163_RS18765 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.36 UW163_RS03075 butyryl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS20410 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.36 RALBFv3_RS10505 butyryl-CoA dehydrogenase low > 76
Pseudomonas stutzeri RCH2 0.54 Psest_2436 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.40 Psest_2445 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.27 13
Ralstonia solanacearum PSI07 0.54 RPSI07_RS02330 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.37 RPSI07_RS02340 acyl-CoA dehydrogenase low > 81
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2357 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.71 Ac3H11_2359 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.3689.1 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.65 Xcc-8004.3688.1 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) 0.82 2
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS15395 methylmalonate-semialdehyde dehydrogenase 0.71 HSERO_RS12750 acyl-CoA dehydrogenase low > 78
Castellaniella sp019104865 MT123 0.49 ABCV34_RS08280 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.68 ABCV34_RS03995 acyl-CoA dehydrogenase family protein low > 48
Klebsiella michiganensis M5al 0.41 BWI76_RS02840 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.10 BWI76_RS16860 acyl-CoA dehydrogenase low > 92

Not shown: 0 genomes with orthologs for Shew_1668 only; 23 genomes with orthologs for Shew_1669 only