Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Dinoroseobacter shibae DFL-12 | 1.0 | Dshi_1649 | | alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) | 1.0 | Dshi_1769 | | 6-phosphogluconate dehydratase (RefSeq) | 0.50 | 7 |
Phaeobacter inhibens DSM 17395 | 0.73 | PGA1_c07890 | | cytoplasmic trehalase (AlgA) (from data) | 0.70 | PGA1_c28000 | | phosphogluconate dehydratase Edd | — | — |
Rhizobium sp. OAE497 | 0.63 | ABIE40_RS03175 | | alpha-glucosidase | 0.62 | ABIE40_RS03190 | | phosphogluconate dehydratase | low | > 107 |
Sinorhizobium meliloti 1021 | 0.63 | SMc03064 | | alpha-glucosidase | 0.62 | SMc03068 | | phosphogluconate dehydratase | low | > 103 |
Agrobacterium fabrum C58 | 0.62 | Atu0594 | | alpha-glucosidase | 0.62 | Atu0598 | | phosphogluconate dehydratase | low | > 89 |
Shewanella amazonensis SB2B | 0.51 | Sama_1662 | | alpha amylase, catalytic region (RefSeq) | 0.58 | Sama_1810 | | phosphogluconate dehydratase (RefSeq) | — | — |
Shewanella loihica PV-4 | 0.51 | Shew_1889 | | alpha amylase, catalytic region (RefSeq) | 0.59 | Shew_2046 | | phosphogluconate dehydratase (RefSeq) | — | — |
Rhodanobacter sp. FW510-T8 | 0.51 | OKGIIK_02445 | amyA | alpha-glucosidase | 0.58 | OKGIIK_14370 | edd | phosphogluconate dehydratase | — | — |
Lysobacter sp. OAE881 | 0.51 | ABIE51_RS18995 | | alpha-glucosidase family protein | 0.58 | ABIE51_RS01610 | | phosphogluconate dehydratase | low | > 62 |
Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.2057.1 | | Maltodextrin glucosidase (EC 3.2.1.20) | 0.53 | Xcc-8004.2447.1 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 74 |
Rhodanobacter denitrificans MT42 | 0.50 | LRK55_RS12785 | | alpha-glucosidase family protein | 0.58 | LRK55_RS07610 | | phosphogluconate dehydratase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.50 | LRK54_RS13085 | | alpha-glucosidase family protein | 0.58 | LRK54_RS07880 | | phosphogluconate dehydratase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS16975 | | alpha-glucosidase | 0.56 | ABZR86_RS14690 | | phosphogluconate dehydratase | low | > 74 |
Pseudomonas stutzeri RCH2 | 0.49 | Psest_0870 | | Alpha-glucosidase (EC 3.2.1.20) (from data) | 0.58 | Psest_0849 | | 6-phosphogluconate dehydratase | 0.58 | 6 |
Shewanella sp. ANA-3 | 0.49 | Shewana3_2311 | | Alpha-glucosidase (EC 3.2.1.20) (from data) | 0.59 | Shewana3_2149 | | phosphogluconate dehydratase (RefSeq) | 0.38 | 9 |
Variovorax sp. SCN45 | 0.49 | GFF6332 | | Maltodextrin glucosidase (EC 3.2.1.20) | 0.52 | GFF6513 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 127 |
Shewanella oneidensis MR-1 | 0.48 | SO2213 | | oligo-1,6-glucosidase (NCBI ptt file) | 0.60 | SO2487 | edd | 6-phosphogluconate dehydratase (NCBI ptt file) | low | > 76 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.46 | A4249_RS09955 | | alpha-amylase family glycosyl hydrolase | 0.54 | A4249_RS10735 | | phosphogluconate dehydratase | 0.73 | 16 |
Sphingomonas koreensis DSMZ 15582 | 0.45 | Ga0059261_1580 | | Glycosidases | 0.52 | Ga0059261_0354 | | 6-phosphogluconate dehydratase (EC 4.2.1.12) | low | > 68 |
Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_02368 | | alpha-glucosidase | 0.61 | CCNA_02134 | | phosphogluconate dehydratase | low | > 67 |
Caulobacter crescentus NA1000 | 0.44 | CCNA_02368 | | alpha-glucosidase | 0.61 | CCNA_02134 | | phosphogluconate dehydratase | low | > 66 |
Azospirillum sp. SherDot2 | 0.37 | MPMX19_04220 | | Oligo-1,6-glucosidase 1 | 0.56 | MPMX19_05118 | | Phosphogluconate dehydratase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS19395 | | alpha-amylase family glycosyl hydrolase | 0.55 | QEN71_RS26920 | | phosphogluconate dehydratase | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.36 | H281DRAFT_02777 | | alpha-glucosidase | 0.56 | H281DRAFT_04278 | | 6-phosphogluconate dehydratase | low | > 103 |
Variovorax sp. OAS795 | 0.33 | ABID97_RS27345 | | alpha-amylase family glycosyl hydrolase | 0.53 | ABID97_RS21300 | | phosphogluconate dehydratase | low | > 91 |
Pseudomonas sp. RS175 | 0.30 | PFR28_01852 | | Oligo-1,6-glucosidase 1 | 0.58 | PFR28_00561 | | Phosphogluconate dehydratase | low | > 88 |
Rahnella sp. WP5 | 0.27 | EX31_RS10265 | | alpha-glucosidase | 0.56 | EX31_RS16630 | | phosphogluconate dehydratase | low | > 89 |
Serratia liquefaciens MT49 | 0.26 | IAI46_12925 | | alpha-glucosidase | 0.56 | IAI46_23175 | | phosphogluconate dehydratase | low | > 86 |
Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.59 | PFLU_RS24330 | | phosphogluconate dehydratase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.59 | PFLU_RS24330 | | phosphogluconate dehydratase | low | > 109 |
Pseudomonas simiae WCS417 | 0.24 | PS417_23045 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.58 | PS417_22690 | | phosphogluconate dehydratase | low | > 88 |
Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_835 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | 0.58 | Pf1N1B4_601 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Escherichia fergusonii Becca | 0.24 | EFB2_04294 | | Trehalose-6-phosphate hydrolase | 0.56 | EFB2_02092 | | Phosphogluconate dehydratase | low | > 86 |
Klebsiella michiganensis M5al | 0.24 | BWI76_RS02960 | | glucohydrolase | 0.56 | BWI76_RS18100 | | phosphogluconate dehydratase | — | — |
Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS24595 | | alpha,alpha-phosphotrehalase | 0.56 | ECOLIN_RS10310 | | phosphogluconate dehydratase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_03796 | | Trehalose-6-phosphate hydrolase | 0.56 | OHPLBJKB_01878 | | Phosphogluconate dehydratase | low | > 73 |
Escherichia coli ECOR38 | 0.24 | HEPCGN_10095 | treC | alpha,alpha-phosphotrehalase | 0.56 | HEPCGN_04745 | edd | phosphogluconate dehydratase | low | > 85 |
Escherichia coli BL21 | 0.24 | ECD_04107 | | trehalose-6-P hydrolase | 0.56 | ECD_01822 | | 6-phosphogluconate dehydratase | low | > 60 |
Escherichia coli ECOR27 | 0.24 | NOLOHH_04165 | treC | alpha,alpha-phosphotrehalase | 0.56 | NOLOHH_16850 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC62 | 0.24 | BNILDI_07345 | treC | alpha,alpha-phosphotrehalase | 0.56 | BNILDI_15645 | edd | phosphogluconate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_15985 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.58 | AO353_03420 | | phosphogluconate dehydratase | low | > 101 |
Escherichia coli BW25113 | 0.24 | b4239 | treC | trehalose-6-P hydrolase (NCBI) | 0.56 | b1851 | edd | phosphogluconate dehydratase (NCBI) | low | > 76 |
Escherichia coli ECRC101 | 0.23 | MCAODC_02405 | treC | alpha,alpha-phosphotrehalase | 0.56 | MCAODC_19065 | edd | phosphogluconate dehydratase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF921 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | 0.56 | GFF1630 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 78 |
Escherichia coli ECRC99 | 0.23 | KEDOAH_16255 | treC | alpha,alpha-phosphotrehalase | 0.56 | KEDOAH_01765 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC102 | 0.23 | NIAGMN_09750 | treC | alpha,alpha-phosphotrehalase | 0.56 | NIAGMN_01720 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC101 | 0.23 | OKFHMN_11900 | treC | alpha,alpha-phosphotrehalase | 0.56 | OKFHMN_26340 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC98 | 0.23 | JDDGAC_15540 | treC | alpha,alpha-phosphotrehalase | 0.56 | JDDGAC_00915 | edd | phosphogluconate dehydratase | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_04665 | | alpha,alpha-phosphotrehalase | 0.49 | CSW01_01480 | | phosphogluconate dehydratase | — | — |
Not shown: 7 genomes with orthologs for Dshi_1649 only; 22 genomes with orthologs for Dshi_1769 only