Conservation of cofitness between BT0793 and BT1379 in Bacteroides thetaiotaomicron VPI-5482

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0793 xylose isomerase (NCBI ptt file) 1.0 BT1379 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.27 12
Bacteroides ovatus ATCC 8483 0.96 BACOVA_02534 xylose isomerase 0.91 BACOVA_00220 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 94
Bacteroides stercoris CC31F 0.94 HMPREF1181_RS14645 xylose isomerase 0.85 HMPREF1181_RS11075 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 56
Phocaeicola dorei CL03T12C01 0.92 ABI39_RS20445 xylose isomerase 0.75 ABI39_RS19925 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 72
Phocaeicola vulgatus CL09T03C04 0.92 HMPREF1058_RS06650 xylose isomerase 0.75 HMPREF1058_RS06170 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 67
Parabacteroides merdae CL09T00C40 0.74 HMPREF1078_RS00455 xylose isomerase 0.70 HMPREF1078_RS13570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.71 Echvi_1876 Xylose isomerase (EC 5.3.1.5) (from data) 0.60 Echvi_2515 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.16 52
Lysobacter sp. OAE881 0.66 ABIE51_RS03615 xylose isomerase 0.38 ABIE51_RS13305 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.5213.1 Xylose isomerase (EC 5.3.1.5) 0.34 Xcc-8004.2944.1 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_14000 xylose isomerase 0.53 CA264_05105 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.65 ABZR88_RS16150 xylose isomerase 0.32 ABZR88_RS06860 HisA/HisF-related TIM barrel protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.63 CA265_RS19715 xylose isomerase 0.33 CA265_RS03615 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 88
Rhizobium sp. OAE497 0.52 ABIE40_RS16810 xylose isomerase 0.28 ABIE40_RS19445 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 107
Sinorhizobium meliloti 1021 0.52 SMc03163 Xylose isomerase (EC 5.3.1.5) (from data) 0.28 SMc02570 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Pectobacterium carotovorum WPP14 0.52 HER17_RS21085 xylose isomerase 0.38 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS00310 xylose isomerase 0.38 HGI48_RS09725 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Dickeya dianthicola ME23 0.51 DZA65_RS00310 xylose isomerase 0.38 DZA65_RS10035 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Klebsiella michiganensis M5al 0.51 BWI76_RS27025 Xylose isomerase (EC 5.3.1.5) (from data) 0.37 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase — —
Enterobacter sp. TBS_079 0.51 MPMX20_00165 Xylose isomerase 0.37 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.21 54
Dickeya dadantii 3937 0.51 DDA3937_RS20935 xylose isomerase 0.37 DDA3937_RS09715 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Agrobacterium fabrum C58 0.51 Atu4483 xylose isomerase 0.28 Atu0040 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase low > 89
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3830 xylose isomerase 0.37 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF444 Xylose isomerase (EC 5.3.1.5) 0.38 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 78
Serratia liquefaciens MT49 0.51 IAI46_00280 xylose isomerase 0.39 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 86
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS32825 Xylose isomerase (EC 5.3.1.5) (from data) 0.28 BPHYT_RS17685 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 109
Rahnella sp. WP5 0.50 EX31_RS09765 xylose isomerase 0.37 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 89
Escherichia coli ECRC99 0.50 KEDOAH_12195 xylA xylose isomerase 0.38 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC101 0.50 OKFHMN_15955 xylA xylose isomerase 0.38 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC98 0.50 JDDGAC_19585 xylA xylose isomerase 0.38 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC102 0.50 NIAGMN_13715 xylA xylose isomerase 0.38 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC101 0.50 MCAODC_06470 xylA xylose isomerase 0.38 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECOR27 0.50 NOLOHH_07900 xylA xylose isomerase 0.38 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 57
Escherichia fergusonii Becca 0.50 EFB2_00242 Xylose isomerase 0.38 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Escherichia coli ECRC62 0.50 BNILDI_03645 xylA xylose isomerase 0.38 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS20390 xylose isomerase 0.38 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Escherichia coli BL21 0.50 ECD_03417 D-xylose isomerase 0.38 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase low > 60
Escherichia coli ECOR38 0.50 HEPCGN_14840 xylA xylose isomerase 0.38 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00139 Xylose isomerase 0.38 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 73
Escherichia coli BW25113 0.50 b3565 xylA xylose isomerase (NCBI) 0.37 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) low > 76
Paraburkholderia graminis OAS925 0.50 ABIE53_004929 xylose isomerase 0.28 ABIE53_003696 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_03876 D-xylose isomerase 0.29 H281DRAFT_05658 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS25875 xylose isomerase 0.29 QEN71_RS27840 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 153
Azospirillum brasilense Sp245 0.49 AZOBR_RS27920 xylose isomerase 0.29 AZOBR_RS01680 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 97
Pantoea sp. MT58 0.49 IAI47_00195 xylose isomerase 0.36 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 76
Dinoroseobacter shibae DFL-12 0.49 Dshi_1996 xylose isomerase (RefSeq) 0.30 Dshi_2578 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (RefSeq) — —
Pseudomonas simiae WCS417 0.49 PS417_10945 Xylose isomerase (EC 5.3.1.5) (from data) 0.31 PS417_01575 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS11305 xylose isomerase 0.30 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS11305 xylose isomerase 0.30 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_1454 Xylose isomerase (EC 5.3.1.5) 0.31 Pf6N2E2_3839 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_2883 D-xylose isomerase 0.30 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_2883 D-xylose isomerase 0.30 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Pseudomonas sp. RS175 0.47 PFR28_02348 Xylose isomerase 0.30 PFR28_04932 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 88
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS14430 xylose isomerase 0.38 ABZR86_RS06710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_28500 Xylose isomerase (EC 5.3.1.5) (from data) 0.31 AO356_09800 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 104
Phaeobacter inhibens DSM 17395 0.46 PGA1_c14000 Xylose isomerase (EC 5.3.1.5) (from data) 0.28 PGA1_c09270 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA — —
Azospirillum sp. SherDot2 0.45 MPMX19_03029 Xylose isomerase 0.28 MPMX19_02543 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 112

Not shown: 0 genomes with orthologs for BT0793 only; 46 genomes with orthologs for BT1379 only