Conservation of cofitness between SO2865 and SO1051 in Shewanella oneidensis MR-1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2865 L-lysine exporter, putative (NCBI ptt file) 1.0 SO1051 periplasmic glucan biosynthesis protein, putative (NCBI ptt file) 0.34 7
Shewanella sp. ANA-3 0.97 Shewana3_1653 lysine exporter protein LysE/YggA (RefSeq) 0.92 Shewana3_0889 mdoD glucan biosynthesis protein D (RefSeq) low > 73
Rhodospirillum rubrum S1H 0.44 Rru_A0657 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.32 Rru_A2135 Twin-arginine translocation pathway signal (NCBI) — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1780 Transporter, LysE family 0.37 PfGW456L13_4768 Glucans biosynthesis protein D precursor low > 87
Pseudomonas sp. DMC3 0.41 GFF5061 Arginine exporter protein ArgO 0.37 GFF1998 Glucans biosynthesis protein D low > 89
Ralstonia solanacearum GMI1000 0.41 RS_RS10170 amino acid transporter 0.44 RS_RS15360 glucan biosynthesis protein D low > 80
Pseudomonas simiae WCS417 0.41 PS417_22175 amino acid transporter LysE 0.36 PS417_05910 glucan biosynthesis protein D low > 88
Ralstonia solanacearum PSI07 0.41 RPSI07_RS14510 amino acid transporter 0.45 RPSI07_RS09835 glucan biosynthesis protein D low > 81
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS02800 amino acid transporter 0.45 RALBFv3_RS07420 glucan biosynthesis protein D — —
Ralstonia solanacearum UW163 0.41 UW163_RS10925 amino acid transporter 0.45 UW163_RS06200 glucan biosynthesis protein D — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_710 Transporter, LysE family 0.36 Pf1N1B4_3022 Glucans biosynthesis protein D precursor low > 87
Pseudomonas orientalis W4I3 0.40 QF045_RS24310 LysE/ArgO family amino acid transporter 0.36 QF045_RS08815 glucan biosynthesis protein D 0.43 46
Pseudomonas sp. RS175 0.40 PFR28_00607 Arginine exporter protein ArgO 0.36 PFR28_00341 Glucans biosynthesis protein D low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_03925 lysine transporter LysE 0.37 AO353_04310 glucan biosynthesis protein D low > 101
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS23800 amino acid transporter 0.36 PFLU_RS05970 glucan biosynthesis protein D low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS23800 amino acid transporter 0.36 PFLU_RS05970 glucan biosynthesis protein D low > 109
Pseudomonas sp. SVBP6 0.39 COO64_RS12095 LysE/ArgO family amino acid transporter 0.30 COO64_RS13445 glucan biosynthesis protein G low > 93
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_05000 lysine transporter LysE 0.36 AO356_06335 glucan biosynthesis protein D low > 104
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2850 Transporter, LysE family 0.36 Pf6N2E2_3135 Glucans biosynthesis protein D precursor low > 103
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.34 Psyr_5085 Twin-arginine translocation pathway signal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.34 Psyr_5085 Twin-arginine translocation pathway signal low > 86
Variovorax sp. SCN45 0.37 GFF2319 Arginine exporter protein ArgO 0.34 GFF6448 Glucans biosynthesis protein D precursor low > 127
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2969 L-lysine exporter 0.35 EX28DRAFT_1233 Periplasmic glucans biosynthesis protein low > 76
Variovorax sp. OAS795 0.36 ABID97_RS23870 LysE/ArgO family amino acid transporter 0.32 ABID97_RS19495 glucan biosynthesis protein D low > 91
Enterobacter sp. TBS_079 0.36 MPMX20_03775 Arginine exporter protein ArgO 0.35 MPMX20_02232 Glucans biosynthesis protein D low > 85
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS14020 LysE/ArgO family amino acid transporter 0.44 ABZR87_RS03070 glucan biosynthesis protein low > 80
Klebsiella michiganensis M5al 0.35 BWI76_RS23965 arginine exporter protein 0.35 BWI76_RS13310 glucan biosynthesis protein D low > 92
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1465.1 Transporter, LysE family 0.53 Xcc-8004.5275.1 Glucans biosynthesis protein D precursor low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF5066 Arginine exporter protein ArgO 0.30 GFF609 Glucans biosynthesis protein G precursor low > 90
Rahnella sp. WP5 0.35 EX31_RS21440 arginine exporter ArgO 0.34 EX31_RS10890 glucan biosynthesis protein low > 89
Klebsiella pneumoniae MKP103 0.35 KDGMDA_04440 arginine exporter ArgO 0.34 KDGMDA_23195 Glucans biosynthesis protein D low > 95
Pectobacterium carotovorum WPP14 0.35 HER17_RS02705 arginine exporter ArgO 0.29 HER17_RS08550 glucan biosynthesis protein G low > 75
Escherichia coli ECOR27 0.34 NOLOHH_11320 argO arginine exporter ArgO 0.34 NOLOHH_19325 opgD glucan biosynthesis protein OpgD low > 76
Escherichia fergusonii Becca 0.34 EFB2_00983 Arginine exporter protein ArgO 0.34 EFB2_02556 Glucans biosynthesis protein D low > 86
Escherichia coli ECOR38 0.34 HEPCGN_18715 argO arginine exporter ArgO 0.34 HEPCGN_26170 opgD glucan biosynthesis protein OpgD low > 88
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16245 arginine exporter ArgO 0.34 ECOLIN_RS08230 glucan biosynthesis protein OpgD — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS31460 amino acid transporter 0.32 RR42_RS28925 glucan biosynthesis protein G low > 128
Escherichia coli ECRC100 0.34 OKFHMN_19410 argO arginine exporter ArgO 0.34 OKFHMN_01645 opgD glucan biosynthesis protein OpgD low > 79
Escherichia coli ECRC99 0.34 KEDOAH_08730 argO arginine exporter ArgO 0.34 KEDOAH_26795 opgD glucan biosynthesis protein OpgD — —
Escherichia coli ECRC98 0.34 JDDGAC_23040 argO arginine exporter ArgO 0.34 JDDGAC_04135 opgD glucan biosynthesis protein OpgD low > 87
Escherichia coli ECRC101 0.34 MCAODC_09930 argO arginine exporter ArgO 0.34 MCAODC_16290 opgD glucan biosynthesis protein OpgD low > 87
Escherichia coli ECRC102 0.34 NIAGMN_17175 argO arginine exporter ArgO 0.34 NIAGMN_25780 opgD glucan biosynthesis protein OpgD low > 80
Alteromonas macleodii MIT1002 0.33 MIT1002_00130 Arginine exporter protein ArgO 0.28 MIT1002_03996 Glucans biosynthesis protein G precursor low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3018 Arginine exporter protein ArgO 0.34 GFF2612 Glucans biosynthesis protein D precursor low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00793 Arginine exporter protein ArgO 0.34 OHPLBJKB_02291 Glucans biosynthesis protein D low > 74
Pantoea sp. MT58 0.33 IAI47_03705 arginine exporter ArgO 0.33 IAI47_06430 glucan biosynthesis protein low > 76
Escherichia coli ECRC62 0.33 BNILDI_09855 argO arginine exporter ArgO 0.34 BNILDI_17780 opgD glucan biosynthesis protein OpgD low > 75
Escherichia coli BL21 0.33 ECD_02754 arginine transporter 0.34 ECD_01381 OPG biosynthetic periplasmic protein low > 61
Escherichia coli BW25113 0.33 b2923 argO arginine exporter protein (NCBI) 0.34 b1424 mdoD glucan biosynthesis protein, periplasmic (RefSeq) low > 76
Serratia liquefaciens MT49 0.33 IAI46_20920 arginine exporter ArgO 0.29 IAI46_09605 glucan biosynthesis protein G low > 87
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS15995 arginine exporter ArgO 0.33 PagCFBP13505_RS00405 glucan biosynthesis protein low > 74
Pseudomonas stutzeri RCH2 0.32 Psest_1165 Lysine efflux permease 0.30 Psest_1576 Periplasmic glucans biosynthesis protein low > 67
Dickeya dianthicola ME23 0.32 DZA65_RS02210 amino acid transporter 0.30 DZA65_RS13755 glucan biosynthesis protein G low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS02085 amino acid transporter 0.30 HGI48_RS13280 glucan biosynthesis protein G low > 71
Dickeya dadantii 3937 0.31 DDA3937_RS02115 amino acid transporter 0.30 DDA3937_RS13220 glucan biosynthesis protein G low > 74
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS57115 LysE/ArgO family amino acid transporter 0.31 DQ20_RS50865 glucan biosynthesis protein G low > 101
Pseudomonas aeruginosa PA14 0.30 IKLFDK_02275 lysine transporter LysE 0.31 IKLFDK_28135 Glucans biosynthesis protein G low > 98
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS24665 LysE/ArgO family amino acid transporter 0.31 DY961_RS11220 glucan biosynthesis protein G low > 100
Erwinia amylovora T8 0.30 OLJFJH_08670 arginine exporter ArgO 0.33 OLJFJH_11490 glucan biosynthesis protein D low > 58
Marinobacter adhaerens HP15 0.29 HP15_869 lysine exporter protein (LYSE/YGGA) 0.53 HP15_1934 periplasmic glucan biosynthesis protein MdoG low > 73
Erwinia tracheiphila SCR3 0.25 LU632_RS05560 LysE family transporter 0.34 LU632_RS08035 glucan biosynthesis protein D low > 73
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_03345 lysE arginine transporter 0.34 IJEDHG_18115 Glucans biosynthesis protein D low > 61
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_05458 Arginine exporter protein ArgO 0.36 GEMAOFIL_01352 Glucans biosynthesis protein D low > 96

Not shown: 26 genomes with orthologs for SO2865 only; 3 genomes with orthologs for SO1051 only