Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | 1.0 | b3771 | ilvD | dihydroxy-acid dehydratase (NCBI) | 0.54 | 12 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | 0.99 | ECOLIN_RS21665 | | dihydroxy-acid dehydratase | low | > 52 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | NOLOHH_06775 | ilvD | dihydroxy-acid dehydratase | low | > 57 |
Escherichia fergusonii Becca | 1.00 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.99 | EFB2_04865 | | Dihydroxy-acid dehydratase | 0.38 | 14 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | JDDGAC_18260 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC101 | 1.00 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | OKFHMN_14640 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | KEDOAH_13510 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | NIAGMN_12395 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | MCAODC_05145 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | BNILDI_04750 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli BL21 | 0.99 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 1.00 | ECD_03649 | | dihydroxyacid dehydratase | low | > 60 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | HEPCGN_13350 | ilvD | dihydroxy-acid dehydratase | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.97 | GFF2901 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | low | > 78 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | 1.00 | OHPLBJKB_04282 | | Dihydroxy-acid dehydratase | low | > 73 |
Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.96 | EX28DRAFT_4443 | | dihydroxy-acid dehydratase | low | > 76 |
Enterobacter sp. TBS_079 | 0.96 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.97 | MPMX20_04499 | | Dihydroxy-acid dehydratase | low | > 85 |
Klebsiella michiganensis M5al | 0.95 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.96 | BWI76_RS00975 | | dihydroxy-acid dehydratase | 0.42 | 40 |
Serratia liquefaciens MT49 | 0.89 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | 0.90 | IAI46_24345 | | dihydroxy-acid dehydratase | — | — |
Dickeya dadantii 3937 | 0.89 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | 0.92 | DDA3937_RS20155 | | dihydroxy-acid dehydratase | low | > 74 |
Pantoea sp. MT58 | 0.89 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | 0.89 | IAI47_01035 | | dihydroxy-acid dehydratase | — | — |
Rahnella sp. WP5 | 0.88 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | 0.87 | EX31_RS15005 | | dihydroxy-acid dehydratase | — | — |
Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | 0.91 | HER17_RS01075 | | dihydroxy-acid dehydratase | low | > 75 |
Dickeya dianthicola ME23 | 0.88 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | 0.91 | DZA65_RS21335 | | dihydroxy-acid dehydratase | low | > 75 |
Dickeya dianthicola 67-19 | 0.87 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | 0.91 | HGI48_RS20295 | | dihydroxy-acid dehydratase | low | > 71 |
Erwinia tracheiphila SCR3 | 0.87 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.86 | LU632_RS24400 | ilvD | dihydroxy-acid dehydratase | 0.68 | 33 |
Paraburkholderia sabiae LMG 24235 | 0.76 | QEN71_RS20525 | | NADP-dependent phosphogluconate dehydrogenase | 0.74 | QEN71_RS21095 | | dihydroxy-acid dehydratase | low | > 153 |
Dyella japonica UNC79MFTsu3.2 | 0.75 | ABZR86_RS13330 | | NADP-dependent phosphogluconate dehydrogenase | 0.28 | ABZR86_RS15945 | | dihydroxy-acid dehydratase | low | > 74 |
Paraburkholderia bryophila 376MFSha3.1 | 0.75 | H281DRAFT_03046 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.74 | H281DRAFT_05312 | | dihydroxyacid dehydratase | low | > 103 |
Paraburkholderia graminis OAS925 | 0.74 | ABIE53_005122 | | 6-phosphogluconate dehydrogenase | 0.74 | ABIE53_006513 | | dihydroxy-acid dehydratase | low | > 113 |
Burkholderia phytofirmans PsJN | 0.73 | BPHYT_RS29625 | | 6-phosphogluconate dehydrogenase | 0.74 | BPHYT_RS10100 | | dihydroxy-acid dehydratase | low | > 109 |
Synechococcus elongatus PCC 7942 | 0.57 | Synpcc7942_0039 | gnd | 6-phosphogluconate dehydrogenase | 0.75 | Synpcc7942_0626 | ilvD | dihydroxy-acid dehydratase | — | — |
Variovorax sp. SCN45 | 0.55 | GFF2954 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.31 | GFF471 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | — | — |
Variovorax sp. OAS795 | 0.55 | ABID97_RS10190 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.31 | ABID97_RS17500 | | dihydroxy-acid dehydratase | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.85 | CSW01_00140 | | dihydroxy-acid dehydratase | low | > 62 |
Mycobacterium tuberculosis H37Rv | 0.54 | Rv1844c | | Probable 6-phosphogluconate dehydrogenase Gnd1 | 0.31 | Rv0189c | | Probable dihydroxy-acid dehydratase IlvD (dad) | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.54 | Echvi_4222 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.29 | Echvi_2055 | | dihydroxy-acid dehydratase | 0.37 | 47 |
Bifidobacterium breve UCC2003 | 0.53 | BBR_RS11465 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.56 | BBR_RS17635 | | dihydroxy-acid dehydratase | — | — |
Parabacteroides merdae CL09T00C40 | 0.52 | HMPREF1078_RS08640 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.65 | HMPREF1078_RS16695 | | dihydroxy-acid dehydratase | low | > 61 |
Bacteroides stercoris CC31F | 0.48 | HMPREF1181_RS12525 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.64 | HMPREF1181_RS08335 | | dihydroxy-acid dehydratase | low | > 56 |
Phocaeicola dorei CL03T12C01 | 0.48 | ABI39_RS14350 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.64 | ABI39_RS12715 | | dihydroxy-acid dehydratase | low | > 72 |
Bacteroides ovatus ATCC 8483 | 0.48 | BACOVA_00509 | | phosphogluconate dehydrogenase (decarboxylating) | 0.62 | BACOVA_03302 | | dihydroxy-acid dehydratase | low | > 94 |
Bacteroides thetaiotaomicron VPI-5482 | 0.47 | BT1222 | | 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) | 0.63 | BT2078 | | dihydroxy-acid dehydratase (NCBI ptt file) | low | > 81 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.47 | ABZR88_RS02970 | | NADP-dependent phosphogluconate dehydrogenase | 0.27 | ABZR88_RS11575 | | dihydroxy-acid dehydratase | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.47 | HMPREF1058_RS18025 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.64 | HMPREF1058_RS16815 | | dihydroxy-acid dehydratase | low | > 67 |
Sinorhizobium meliloti 1021 | 0.47 | SMc04262 | | 6-phosphogluconate dehydrogenase | 0.75 | SMc04045 | | dihydroxy-acid dehydratase | low | > 103 |
Rhizobium sp. OAE497 | 0.46 | ABIE40_RS11035 | | NADP-dependent phosphogluconate dehydrogenase | 0.75 | ABIE40_RS08005 | | dihydroxy-acid dehydratase | low | > 107 |
Agrobacterium fabrum C58 | 0.46 | Atu1526 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.73 | Atu1918 | | dihydroxy-acid dehydratase | — | — |
Alteromonas macleodii MIT1002 | 0.46 | MIT1002_02397 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | 0.79 | MIT1002_04041 | | Dihydroxy-acid dehydratase | low | > 70 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.43 | CA265_RS09805 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.27 | CA265_RS15795 | | dihydroxy-acid dehydratase | 0.43 | 68 |
Azospirillum brasilense Sp245 | 0.43 | AZOBR_RS15725 | | 6-phosphogluconate dehydrogenase | 0.74 | AZOBR_RS15015 | | dihydroxy-acid dehydratase | low | > 97 |
Shewanella oneidensis MR-1 | 0.43 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | 0.80 | SO4345 | ilvD | dihydroxy-acid dehydratase (NCBI ptt file) | low | > 76 |
Shewanella amazonensis SB2B | 0.43 | Sama_1365 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.79 | Sama_3279 | | dihydroxy-acid dehydratase (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.43 | Shewana3_1677 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.80 | Shewana3_0358 | | dihydroxy-acid dehydratase (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.43 | Shew_2561 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.78 | Shew_0292 | | dihydroxy-acid dehydratase (RefSeq) | low | > 60 |
Not shown: 0 genomes with orthologs for b2029 only; 48 genomes with orthologs for b3771 only