Conservation of cofitness between b2029 and b3770 in Escherichia coli BW25113

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.53 19
Escherichia coli ECOR27 1.00 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia fergusonii Becca 1.00 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC101 1.00 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC101 1.00 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC99 1.00 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC102 1.00 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC98 1.00 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC62 0.99 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase
Escherichia coli BL21 0.99 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating 1.00 ECD_03648 branched-chain amino acid aminotransferase low > 60
Escherichia coli ECOR38 0.99 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I low > 76
Enterobacter sp. TBS_079 0.96 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Klebsiella michiganensis M5al 0.95 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.97 BWI76_RS00970 branched chain amino acid aminotransferase low > 92
Serratia liquefaciens MT49 0.89 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase 0.92 IAI46_24350 branched-chain-amino-acid transaminase
Pantoea sp. MT58 0.89 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase 0.91 IAI47_01030 branched-chain amino acid transaminase
Dickeya dadantii 3937 0.89 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.59 12
Pectobacterium carotovorum WPP14 0.88 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Rahnella sp. WP5 0.88 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase 0.90 EX31_RS15000 branched-chain amino acid transaminase
Dickeya dianthicola ME23 0.88 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase 0.91 DZA65_RS21340 branched-chain amino acid transaminase 0.38 33
Dickeya dianthicola 67-19 0.87 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Erwinia tracheiphila SCR3 0.87 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase 0.90 LU632_RS24405 branched-chain amino acid transaminase low > 74
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS13330 NADP-dependent phosphogluconate dehydrogenase 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.58 22
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_005122 6-phosphogluconate dehydrogenase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase low > 113
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS29625 6-phosphogluconate dehydrogenase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Synechococcus elongatus PCC 7942 0.57 Synpcc7942_0039 gnd 6-phosphogluconate dehydrogenase 0.29 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase low > 38
Variovorax sp. SCN45 0.55 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Variovorax sp. OAS795 0.55 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.44 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Mycobacterium tuberculosis H37Rv 0.54 Rv1844c Probable 6-phosphogluconate dehydrogenase Gnd1 0.19 Rv2210c Branched-chain amino acid transaminase IlvE
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_4222 6-phosphogluconate dehydrogenase, decarboxylating 0.18 Echvi_2202 branched-chain amino acid aminotransferase, group II low > 79
Bifidobacterium breve UCC2003 0.53 BBR_RS11465 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.17 BBR_RS15210 branched-chain amino acid aminotransferase
Parabacteroides merdae CL09T00C40 0.52 HMPREF1078_RS08640 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.19 HMPREF1078_RS07855 branched-chain amino acid aminotransferase low > 61
Bacteroides stercoris CC31F 0.48 HMPREF1181_RS12525 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS14350 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.18 ABI39_RS01415 branched-chain amino acid aminotransferase low > 72
Bacteroides ovatus ATCC 8483 0.48 BACOVA_00509 phosphogluconate dehydrogenase (decarboxylating) 0.30 BACOVA_03679 branched-chain-amino-acid transaminase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.47 BT1222 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) 0.19 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS02970 NADP-dependent phosphogluconate dehydrogenase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase
Phocaeicola vulgatus CL09T03C04 0.47 HMPREF1058_RS18025 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.18 HMPREF1058_RS02220 branched-chain amino acid aminotransferase low > 67
Sinorhizobium meliloti 1021 0.47 SMc04262 6-phosphogluconate dehydrogenase 0.21 SMc02896 branched-chain amino acid aminotransferase 0.21 81
Rhizobium sp. OAE497 0.46 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase low > 107
Alteromonas macleodii MIT1002 0.46 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 low > 70
Agrobacterium fabrum C58 0.46 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating 0.18 Atu0871 branched-chain-amino-acid aminotransferase low > 89
Azospirillum brasilense Sp245 0.43 AZOBR_RS15725 6-phosphogluconate dehydrogenase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase low > 97
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS09805 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.29 CA265_RS15785 branched-chain-amino-acid transaminase low > 88
Shewanella amazonensis SB2B 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.43 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.43 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.43 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) low > 60

Not shown: 0 genomes with orthologs for b2029 only; 49 genomes with orthologs for b3770 only