Conservation of cofitness between b0125 and b4239 in Escherichia coli BW25113

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0125 hpt hypoxanthine phosphoribosyltransferase (VIMSS) 1.0 b4239 treC trehalose-6-P hydrolase (NCBI) 0.25 15
Escherichia fergusonii Becca 1.00 EFB2_03920 Hypoxanthine phosphoribosyltransferase 0.98 EFB2_04294 Trehalose-6-phosphate hydrolase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00695 hypoxanthine phosphoribosyltransferase 0.98 ECOLIN_RS24595 alpha,alpha-phosphotrehalase low > 52
Escherichia coli ECRC101 1.00 MCAODC_00960 hpt hypoxanthine phosphoribosyltransferase 0.99 MCAODC_02405 treC alpha,alpha-phosphotrehalase
Escherichia coli ECRC98 1.00 JDDGAC_14040 hpt hypoxanthine phosphoribosyltransferase 0.98 JDDGAC_15540 treC alpha,alpha-phosphotrehalase
Escherichia coli ECOR38 1.00 HEPCGN_08425 hpt hypoxanthine phosphoribosyltransferase 0.99 HEPCGN_10095 treC alpha,alpha-phosphotrehalase low > 85
Escherichia coli BL21 1.00 ECD_00124 hypoxanthine phosphoribosyltransferase 0.99 ECD_04107 trehalose-6-P hydrolase low > 60
Escherichia coli ECRC99 1.00 KEDOAH_17710 hpt hypoxanthine phosphoribosyltransferase 0.99 KEDOAH_16255 treC alpha,alpha-phosphotrehalase
Escherichia coli ECRC101 1.00 OKFHMN_10445 hpt hypoxanthine phosphoribosyltransferase 0.99 OKFHMN_11900 treC alpha,alpha-phosphotrehalase
Escherichia coli ECOR27 1.00 NOLOHH_02790 hpt hypoxanthine phosphoribosyltransferase 0.99 NOLOHH_04165 treC alpha,alpha-phosphotrehalase
Escherichia coli ECRC102 1.00 NIAGMN_08295 hpt hypoxanthine phosphoribosyltransferase 0.99 NIAGMN_09750 treC alpha,alpha-phosphotrehalase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03536 Hypoxanthine phosphoribosyltransferase 0.99 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase low > 73
Escherichia coli ECRC62 0.99 BNILDI_08880 hpt hypoxanthine phosphoribosyltransferase 0.99 BNILDI_07345 treC alpha,alpha-phosphotrehalase
Enterobacter sp. TBS_079 0.98 MPMX20_00819 Hypoxanthine phosphoribosyltransferase 0.82 MPMX20_00537 Trehalose-6-phosphate hydrolase 0.52 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF103 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) 0.86 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3722 hypoxanthine phosphoribosyltransferase 0.82 EX28DRAFT_3438 alpha,alpha-phosphotrehalase
Klebsiella michiganensis M5al 0.96 BWI76_RS04955 hypoxanthine phosphoribosyltransferase 0.85 BWI76_RS02960 glucohydrolase
Serratia liquefaciens MT49 0.91 IAI46_21275 hypoxanthine phosphoribosyltransferase 0.74 IAI46_02150 alpha,alpha-phosphotrehalase
Rahnella sp. WP5 0.88 EX31_RS03330 hypoxanthine phosphoribosyltransferase 0.68 EX31_RS08390 alpha,alpha-phosphotrehalase low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS05530 hypoxanthine phosphoribosyltransferase 0.71 HER17_RS07195 alpha,alpha-phosphotrehalase low > 75
Erwinia tracheiphila SCR3 0.84 LU632_RS20135 hpt hypoxanthine phosphoribosyltransferase 0.71 LU632_RS20965 alpha,alpha-phosphotrehalase low > 74
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_03105 hypoxanthine phosphoribosyltransferase 0.57 CSW01_04665 alpha,alpha-phosphotrehalase
Shewanella loihica PV-4 0.68 Shew_3142 hypoxanthine phosphoribosyltransferase (RefSeq) 0.26 Shew_1889 alpha amylase, catalytic region (RefSeq)
Shewanella sp. ANA-3 0.67 Shewana3_0793 hypoxanthine phosphoribosyltransferase (RefSeq) 0.26 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) low > 73
Shewanella amazonensis SB2B 0.67 Sama_0771 hypoxanthine phosphoribosyltransferase (RefSeq) 0.26 Sama_1662 alpha amylase, catalytic region (RefSeq) low > 62
Shewanella oneidensis MR-1 0.66 SO3803 hpt-2 hypoxanthine phosphoribosyltransferase (NCBI ptt file) 0.25 SO2213 oligo-1,6-glucosidase (NCBI ptt file) low > 76
Dinoroseobacter shibae DFL-12 0.54 Dshi_1581 hypoxanthine phosphoribosyltransferase (RefSeq) 0.23 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) low > 64
Phaeobacter inhibens DSM 17395 0.53 PGA1_c14710 hypoxanthine-guanine phosphoribosyltransferase Hpt 0.25 PGA1_c07890 cytoplasmic trehalase (AlgA) (from data) low > 62
Bifidobacterium breve UCC2003 0.39 BBR_RS18185 hypoxanthine phosphoribosyltransferase 0.39 BBR_RS20135 alpha-glucosidase low > 34
Sinorhizobium meliloti 1021 0.37 SMc00719 hypoxanthine-guanine phosphoribosyltransferase 0.26 SMc01532 alpha-glycosylase low > 103
Agrobacterium fabrum C58 0.36 Atu3604 hypoxanthine phosphoribosyltransferase 0.26 Atu0594 alpha-glucosidase low > 89
Rhizobium sp. OAE497 0.36 ABIE40_RS17550 hypoxanthine phosphoribosyltransferase 0.41 ABIE40_RS29140 alpha-glucosidase low > 107
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_13385 hypoxanthine phosphoribosyltransferase 0.30 CA264_04855 alpha-amylase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_0594 hypoxanthine phosphoribosyltransferase 0.18 Echvi_2850 Alpha-amylase (EC 3.2.1.1) (from data) low > 79
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_02297 hypoxanthine-guanine phosphoribosyltransferase 0.26 CCNA_02368 alpha-glucosidase low > 67
Caulobacter crescentus NA1000 0.24 CCNA_02297 hypoxanthine-guanine phosphoribosyltransferase 0.26 CCNA_02368 alpha-glucosidase low > 66
Rhodanobacter denitrificans MT42 0.24 LRK55_RS16730 hypoxanthine-guanine phosphoribosyltransferase 0.26 LRK55_RS12785 alpha-glucosidase family protein low > 63
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_07825 hptA hypoxanthine-guanine phosphoribosyltransferase 0.26 OKGIIK_02445 amyA alpha-glucosidase low > 52
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS17015 hypoxanthine-guanine phosphoribosyltransferase 0.26 LRK54_RS13085 alpha-glucosidase family protein 0.65 2
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS11415 phosphoribosyltransferase family protein 0.26 A4249_RS09955 alpha-amylase family glycosyl hydrolase low > 48
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS07105 hypoxanthine-guanine phosphoribosyltransferase 0.26 ABZR86_RS16975 alpha-glucosidase low > 74
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_14860 hypoxanthine-guanine phosphoribosyltransferase 0.53 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_2935 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) 0.52 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) low > 87
Pseudomonas sp. RS175 0.19 PFR28_03640 Hypoxanthine-guanine phosphoribosyltransferase 0.28 PFR28_01852 Oligo-1,6-glucosidase 1 low > 88
Pseudomonas fluorescens SBW25 0.19 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase low > 109
Pseudomonas simiae WCS417 0.19 PS417_04440 hypoxanthine-guanine phosphoribosyltransferase 0.53 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) low > 88
Pseudomonas stutzeri RCH2 0.18 Psest_1121 Hypoxanthine-guanine phosphoribosyltransferase 0.28 Psest_3785 Glycosidases low > 67
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS27245 hypoxanthine-guanine phosphoribosyltransferase 0.29 QEN71_RS19395 alpha-amylase family glycosyl hydrolase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_06269 hypoxanthine phosphoribosyltransferase 0.27 H281DRAFT_02777 alpha-glucosidase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3662.1 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) 0.26 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20)

Not shown: 35 genomes with orthologs for b0125 only; 8 genomes with orthologs for b4239 only