| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b0331 | prpB | 2-methylisocitrate lyase (NCBI) | 1.0 | b4214 | cysQ | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | 0.29 | 12 |
| Escherichia coli BL21 | 1.00 | ECD_00286 | | 2-methylisocitrate lyase | 1.00 | ECD_04086 | | 3'(2'),5'-bisphosphate nucleotidase | low | > 61 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_23190 | prpB | methylisocitrate lyase | 1.00 | BNILDI_07225 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_01775 | prpB | methylisocitrate lyase | 1.00 | NOLOHH_04295 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_03339 | | 2-methylisocitrate lyase | 1.00 | OHPLBJKB_03819 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | low | > 73 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_19065 | prpB | methylisocitrate lyase | 1.00 | KEDOAH_16120 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | — | — |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_08900 | prpB | methylisocitrate lyase | 1.00 | OKFHMN_12035 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 80 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03706 | | 2-methylisocitrate lyase | 1.00 | EFB2_04314 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 86 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_28130 | prpB | methylisocitrate lyase | 1.00 | MCAODC_02550 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 87 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_12555 | prpB | methylisocitrate lyase | 1.00 | JDDGAC_15675 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 86 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_07485 | prpB | methylisocitrate lyase | 1.00 | HEPCGN_10230 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 87 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_06955 | prpB | methylisocitrate lyase | 1.00 | NIAGMN_09885 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | — | — |
| Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS02150 | | methylisocitrate lyase | 1.00 | ECOLIN_RS24480 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF4263 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.86 | GFF868 | | '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 | low | > 78 |
| Pseudomonas stutzeri RCH2 | 0.77 | Psest_2321 | | methylisocitrate lyase | 0.38 | Psest_3960 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.77 | Psyr_2085 | | methylisocitrate lyase | 0.39 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.77 | Psyr_2085 | | methylisocitrate lyase | 0.39 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.76 | AO353_00900 | | 2-methylisocitrate lyase | 0.40 | AO353_11850 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.76 | AO356_20865 | | 2-methylisocitrate lyase | 0.42 | AO356_10075 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS22690 | | methylisocitrate lyase | 0.41 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.76 | Pf6N2E2_6061 | | Methylisocitrate lyase (EC 4.1.3.30) (from data) | 0.43 | Pf6N2E2_3885 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | low | > 103 |
| Pseudomonas putida KT2440 | 0.76 | PP_2334 | | 2-methylisocitrate lyase | 0.41 | PP_0261 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS22690 | | methylisocitrate lyase | 0.41 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 109 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_02928 | | 2-methylisocitrate lyase | 0.42 | PFR28_04887 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | low | > 88 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_21080 | | 2-methylisocitrate lyase | 0.41 | PS417_01295 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_3819 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.40 | Pf1N1B4_1668 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_4118 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.41 | PfGW456L13_403 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.36 | 42 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_01690 | | methylisocitrate lyase | 0.38 | OH686_14315 | | 3'(2'),5'-bisphosphate nucleotidase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.71 | Xcc-8004.3981.1 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.43 | Xcc-8004.1562.1 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.69 | ABZR86_RS08480 | | methylisocitrate lyase | 0.39 | ABZR86_RS10205 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_06565 | prpB | methylisocitrate lyase | 0.44 | OKGIIK_10995 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_06735 | | methylisocitrate lyase | 0.37 | CSW01_13735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS00470 | | methylisocitrate lyase | 0.40 | LRK55_RS03900 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.65 | LRK54_RS00695 | | methylisocitrate lyase | 0.40 | LRK54_RS04130 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 59 |
| Lysobacter sp. OAE881 | 0.65 | ABIE51_RS06015 | | methylisocitrate lyase | 0.42 | ABIE51_RS05275 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 62 |
| Shewanella loihica PV-4 | 0.63 | Shew_1820 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.51 | Shew_1427 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | low | > 60 |
| Kangiella aquimarina DSM 16071 | 0.62 | B158DRAFT_1343 | | methylisocitrate lyase | 0.45 | B158DRAFT_2344 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_03129 | | Methylisocitrate lyase | 0.42 | MIT1002_01272 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | — | — |
| Marinobacter adhaerens HP15 | 0.62 | HP15_1932 | | methylisocitrate lyase 2 | 0.42 | HP15_2405 | | 3'(2'), 5'-bisphosphate nucleotidase | — | — |
| Shewanella amazonensis SB2B | 0.61 | Sama_3294 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.48 | Sama_2232 | | cysQ protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3825 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.45 | Shewana3_2791 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.59 | SO0345 | prpB | methylisocitrate lyase (NCBI ptt file) | 0.44 | SO1655 | cysQ-2 | cysQ protein (NCBI ptt file) | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.59 | MPMX26_01289 | | 2-methylisocitrate lyase | 0.30 | MPMX26_01312 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2320 | | Ankyrin (NCBI) | 0.34 | Rru_A0445 | | 3(2),5 -bisphosphate nucleotidase (NCBI) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.35 | TX73_012370 | | methylisocitrate lyase | 0.29 | TX73_008350 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 86 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_04657 | | 2,3-dimethylmalate lyase | 0.40 | MPMX19_01084 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_0689 | | isocitrate lyase family protein (RefSeq) | 0.36 | Dshi_3574 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS16605 | | isocitrate lyase/PEP mutase family protein | 0.21 | ABIE41_RS11005 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | low | > 77 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS27785 | | carboxyvinyl-carboxyphosphonate phosphorylmutase | 0.35 | AZOBR_RS09435 | | 3'-5'-bisphosphate nucleotidase | low | > 97 |