| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b3751 | rbsB | D-ribose transporter subunit (NCBI) | 1.0 | b3750 | rbsC | ribose ABC transporter permease protein (NCBI) | 0.63 | 2 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_12490 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | NIAGMN_12495 | rbsC | ribose ABC transporter permease | low | > 80 |
| Escherichia coli BL21 | 1.00 | ECD_03637 | | D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor | 1.00 | ECD_03636 | | D-ribose ABC transporter permease | low | > 61 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_14735 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | OKFHMN_14740 | rbsC | ribose ABC transporter permease | low | > 79 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_04655 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | BNILDI_04650 | rbsC | ribose ABC transporter permease | low | > 75 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_05240 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | MCAODC_05245 | rbsC | ribose ABC transporter permease | 0.46 | 9 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_06870 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | NOLOHH_06875 | rbsC | ribose ABC transporter permease | low | > 76 |
| Escherichia fergusonii Becca | 1.00 | EFB2_04882 | | Ribose import binding protein RbsB | 1.00 | EFB2_04883 | | Ribose import permease protein RbsC | low | > 86 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_18355 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | JDDGAC_18360 | rbsC | ribose ABC transporter permease | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_04302 | | Ribose import binding protein RbsB | 1.00 | OHPLBJKB_04303 | | Ribose import permease protein RbsC | low | > 74 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_13415 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | KEDOAH_13410 | rbsC | ribose ABC transporter permease | — | — |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS21565 | | ribose ABC transporter substrate-binding protein RbsB | 1.00 | ECOLIN_RS21560 | | ribose ABC transporter permease | 0.68 | 10 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_13445 | rbsB | ribose ABC transporter substrate-binding protein RbsB | 1.00 | HEPCGN_13450 | rbsC | ribose ABC transporter permease | low | > 88 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_4027 | | ABC-type sugar transport system, periplasmic component | 0.93 | EX28DRAFT_4026 | | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF1706 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | 0.92 | GFF1707 | | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.97 | MPMX20_04616 | | Ribose import binding protein RbsB | 0.93 | MPMX20_04617 | | Ribose import permease protein RbsC | low | > 85 |
| Klebsiella pneumoniae MKP103 | 0.96 | KDGMDA_08890 | | ribose ABC transporter substrate-binding protein RbsB | 0.92 | KDGMDA_08885 | | ribose ABC transporter permease | low | > 95 |
| Klebsiella michiganensis M5al | 0.95 | BWI76_RS00285 | | D-ribose ABC transporter substrate-binding protein | 0.92 | BWI76_RS00280 | | ribose ABC transporter permease | 0.32 | 3 |
| Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS21535 | | ribose ABC transporter substrate-binding protein RbsB | 0.90 | HER17_RS21540 | | ribose ABC transporter permease | low | > 75 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS00045 | | ribose ABC transporter substrate-binding protein RbsB | 0.87 | DDA3937_RS00040 | | ribose ABC transporter permease | low | > 74 |
| Rahnella sp. WP5 | 0.83 | EX31_RS06185 | | ribose ABC transporter substrate-binding protein RbsB | 0.85 | EX31_RS06180 | | ribose ABC transporter permease | low | > 89 |
| Erwinia amylovora T8 | 0.82 | OLJFJH_05405 | | ribose ABC transporter substrate-binding protein RbsB | 0.86 | OLJFJH_05400 | | ribose ABC transporter permease | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.82 | PagCFBP13505_RS18970 | | ribose ABC transporter substrate-binding protein RbsB | 0.85 | PagCFBP13505_RS18975 | | ribose ABC transporter permease | low | > 74 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_25060 | | ribose ABC transporter substrate-binding protein RbsB | 0.87 | IAI46_25065 | | ribose ABC transporter permease | low | > 86 |
| Pantoea sp. MT58 | 0.81 | IAI47_00365 | | ribose ABC transporter substrate-binding protein RbsB | 0.85 | IAI47_00360 | | ribose ABC transporter permease | low | > 76 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS21320 | | ribose ABC transporter substrate-binding protein RbsB | 0.87 | HGI48_RS21325 | | ribose ABC transporter permease | low | > 71 |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS22300 | | ribose ABC transporter substrate-binding protein RbsB | 0.87 | DZA65_RS22305 | | ribose ABC transporter permease | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.72 | CSW01_14660 | | ribose ABC transporter substrate-binding protein RbsB | 0.73 | CSW01_14655 | | ribose ABC transporter permease | low | > 62 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_03760 | | Ribose import binding protein RbsB | 0.46 | MPMX19_03759 | | Ribose import permease protein RbsC | low | > 112 |
| Bifidobacterium breve UCC2003 | 0.42 | BBR_RS17760 | | D-ribose ABC transporter substrate-binding protein | 0.32 | BBR_RS17765 | | ABC transporter permease | 0.50 | 3 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.34 | Echvi_1284 | | ABC-type sugar transport system, periplasmic component | 0.44 | Echvi_1280 | | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.32 | ABZR88_RS15215 | | D-ribose ABC transporter substrate-binding protein | 0.45 | ABZR88_RS15230 | | ABC transporter permease | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.28 | H281DRAFT_02705 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | 0.38 | H281DRAFT_04148 | | monosaccharide ABC transporter membrane protein, CUT2 family | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.27 | QEN71_RS35805 | | substrate-binding domain-containing protein | 0.39 | QEN71_RS02650 | | ABC transporter permease | low | > 153 |
| Caulobacter crescentus NA1000 Δfur | 0.25 | CCNA_00902 | | inositol ABC transporter, periplasmic inositol-binding protein IbpA | 0.29 | CCNA_00904 | | inositol ABC transport system, permease protein IatP | 0.49 | 47 |
| Caulobacter crescentus NA1000 | 0.25 | CCNA_00902 | | inositol ABC transporter, periplasmic inositol-binding protein IbpA | 0.29 | CCNA_00904 | | inositol ABC transport system, permease protein IatP | 0.66 | 4 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS11480 | | D-ribose ABC transporter, substrate-binding component RbsB (from data) | 0.41 | HSERO_RS05325 | | ribose ABC transporter permease | low | > 78 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_161 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | 0.31 | Pf6N2E2_524 | | Inositol transport system permease protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_00970 | | LacI family transcriptional regulator | 0.31 | AO356_23210 | | ABC transporter | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS19520 | | substrate-binding domain-containing protein | 0.41 | PFLU_RS19510 | | sugar ABC transporter permease | 0.16 | 7 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS19520 | | substrate-binding domain-containing protein | 0.41 | PFLU_RS19510 | | sugar ABC transporter permease | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.23 | COO64_RS10325 | | sugar ABC transporter substrate-binding protein | 0.28 | COO64_RS10335 | | ABC transporter permease | low | > 93 |
| Pseudomonas aeruginosa PA14 | 0.23 | IKLFDK_09500 | | D-ribose/D-allose-binding protein | 0.26 | IKLFDK_09510 | | ABC transporter permease | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_6035 | | D-ribose ABC transporter, substrate-binding component RbsB (from data) | 0.31 | Pf1N1B4_4287 | | Inositol transport system permease protein | low | > 87 |
| Pseudomonas putida KT2440 | 0.22 | PP_2454 | | ribose ABC transporter, periplasmic ribose-binding subunit | 0.28 | PP_2456 | | D-ribose ABC transporter - permease subunit | 0.27 | 1 |
| Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_2151 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | 0.37 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.22 | AO353_20815 | | LacI family transcriptional regulator | 0.31 | AO353_21390 | | m-Inositol ABC transporter, permease component (iatP) (from data) | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_2151 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | 0.37 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | — | — |
| Pseudomonas simiae WCS417 | 0.22 | PS417_17735 | | LacI family transcriptional regulator | 0.41 | PS417_17725 | | ribose ABC transporter permease | 0.30 | 3 |
| Pseudomonas sp. BP01 | 0.22 | JOY50_RS04270 | | sugar ABC transporter substrate-binding protein | 0.26 | JOY50_RS04280 | | ABC transporter permease | low | > 84 |
| Variovorax sp. SCN45 | 0.21 | GFF2140 | | Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1) | 0.27 | GFF3691 | | ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS32885 | | LacI family transcriptional regulator | 0.33 | RR42_RS03365 | | fructose ABC transporter, permease component (FrcC) (from data) | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS09970 | | sugar ABC transporter substrate-binding protein | 0.33 | ABZR87_RS12030 | | ABC transporter permease | low | > 80 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS19775 | | sugar ABC transporter substrate-binding protein | 0.27 | ABID97_RS00430 | | ABC transporter permease | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_3035 | | Fructose ABC transporter, substrate-binding component FrcB (from data) | 0.30 | Ac3H11_3036 | | Fructose ABC transporter, permease component FrcC | 0.94 | 1 |
| Rhodospirillum rubrum S1H | 0.17 | Rru_A0247 | | Periplasmic binding protein/LacI transcriptional regulator (NCBI) | 0.43 | Rru_A0248 | | inner-membrane translocator (NCBI) | low | > 58 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.16 | GFF5611 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | 0.27 | GFF198 | | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | low | > 90 |
| Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_0390 | | periplasmic binding protein/LacI transcriptional regulator (RefSeq) | 0.25 | Dshi_0389 | | Monosaccharide-transporting ATPase (RefSeq) | 0.33 | 9 |
Not shown: 6 genomes with orthologs for b3751 only; 12 genomes with orthologs for b3750 only