Conservation of cofitness between b3359 and b3172 in Escherichia coli BW25113

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 1.0 b3172 argG argininosuccinate synthase (NCBI) 0.51 4
Escherichia coli BL21 1.00 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 1.00 ECD_03038 argininosuccinate synthetase 0.47 45
Escherichia coli ECRC102 1.00 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 NIAGMN_15850 argG argininosuccinate synthase
Escherichia coli ECRC99 1.00 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 KEDOAH_10060 argG argininosuccinate synthase
Escherichia coli ECRC100 1.00 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 OKFHMN_18090 argG argininosuccinate synthase low > 80
Escherichia coli ECRC101 1.00 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 MCAODC_08610 argG argininosuccinate synthase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 JDDGAC_21715 argG argininosuccinate synthase low > 86
Escherichia fergusonii Becca 1.00 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 1.00 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli ECRC62 1.00 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 BNILDI_01645 argG argininosuccinate synthase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 NOLOHH_09890 argG argininosuccinate synthase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 ECOLIN_RS18275 argininosuccinate synthase low > 55
Escherichia coli ECOR38 0.99 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 1.00 HEPCGN_16965 argG argininosuccinate synthase 0.74 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 1.00 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.97 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.95 MPMX20_04077 Argininosuccinate synthase 0.56 44
Enterobacter asburiae PDN3 0.90 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.95 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) 0.71 29
Klebsiella michiganensis M5al 0.90 BWI76_RS26000 aspartate aminotransferase family protein 0.95 BWI76_RS25115 argininosuccinate synthase 0.72 16
Pectobacterium carotovorum WPP14 0.79 HER17_RS01910 aspartate aminotransferase family protein 0.93 HER17_RS21055 argininosuccinate synthase 0.93 5
Erwinia tracheiphila SCR3 0.79 LU632_RS22810 aspartate aminotransferase family protein 0.16 LU632_RS19605 argininosuccinate synthase 0.85 23
Dickeya dianthicola 67-19 0.79 HGI48_RS19570 aspartate aminotransferase family protein 0.92 HGI48_RS00355 argininosuccinate synthase 0.84 17
Dickeya dadantii 3937 0.79 DDA3937_RS19450 aspartate aminotransferase family protein 0.92 DDA3937_RS20890 argininosuccinate synthase 0.88 4
Dickeya dianthicola ME23 0.78 DZA65_RS20655 aspartate aminotransferase family protein 0.92 DZA65_RS00355 argininosuccinate synthase 0.90 6
Serratia liquefaciens MT49 0.78 IAI46_23590 aspartate aminotransferase family protein 0.15 IAI46_24505 argininosuccinate synthase low > 86
Rahnella sp. WP5 0.77 EX31_RS04630 aspartate aminotransferase family protein 0.90 EX31_RS13445 argininosuccinate synthase 0.89 9
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.12 PP_1088 Argininosuccinate synthase 0.22 90
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.12 OH686_03930 argininosuccinate synthase low > 80
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.14 SO0278 argG argininosuccinate synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.15 Shew_0205 argininosuccinate synthase (RefSeq) 0.71 32
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS23315 aspartate aminotransferase family protein 0.11 PFLU_RS05725 argininosuccinate synthase
Pseudomonas fluorescens SBW25 0.65 PFLU_RS23315 aspartate aminotransferase family protein 0.11 PFLU_RS05725 argininosuccinate synthase
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.13 Shewana3_3902 argininosuccinate synthase (RefSeq) low > 73
Pseudomonas sp. RS175 0.64 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.12 PFR28_03353 Argininosuccinate synthase
Pseudomonas stutzeri RCH2 0.64 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.12 Psest_3121 argininosuccinate synthase
Marinobacter adhaerens HP15 0.59 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.11 HP15_2367 argininosuccinate synthase
Bosea sp. OAE506 0.41 ABIE41_RS04340 aspartate aminotransferase family protein 0.12 ABIE41_RS00340 argininosuccinate synthase
Methanococcus maripaludis JJ 0.41 MMJJ_RS08660 acetylornithine transaminase 0.11 MMJJ_RS05060 argininosuccinate synthase
Methanococcus maripaludis S2 0.41 MMP_RS05690 acetylornithine transaminase 0.12 MMP_RS00425 argininosuccinate synthase
Rhodopseudomonas palustris CGA009 0.41 TX73_024810 aspartate aminotransferase family protein 0.79 TX73_002040 argininosuccinate synthase
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.13 CCNA_00128 argininosuccinate synthase low > 67
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.13 CCNA_00128 argininosuccinate synthase
Rhizobium sp. OAE497 0.40 ABIE40_RS02320 aspartate aminotransferase family protein 0.14 ABIE40_RS18150 argininosuccinate synthase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.14 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.98 2
Agrobacterium fabrum C58 0.40 Atu0428 acetylornithine aminotransferase 0.14 Atu2667 argininosuccinate synthase
Magnetospirillum magneticum AMB-1 0.39 AMB_RS01605 aspartate aminotransferase family protein 0.13 AMB_RS05720 argininosuccinate synthase
Rhodospirillum rubrum S1H 0.38 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.15 Rru_A3751 Argininosuccinate synthase (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.38 PGA1_c24230 acetylornithine aminotransferase ArgD 0.14 PGA1_c34920 argininosuccinate synthase ArgG
Sinorhizobium meliloti 1021 0.38 SMc02138 acetylornithine transaminase 0.14 SMc03826 argininosuccinate synthase 0.82 62
Azospirillum brasilense Sp245 0.38 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.14 AZOBR_RS00785 argininosuccinate synthase
Dinoroseobacter shibae DFL-12 0.37 Dshi_0798 acetylornithine and succinylornithine aminotransferase (RefSeq) 0.13 Dshi_3472 Argininosuccinate synthase (RefSeq)
Dechlorosoma suillum PS 0.33 Dsui_3250 acetylornithine/succinylornithine aminotransferase 0.13 Dsui_3248 argininosuccinate synthase
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.78 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5)
Variovorax sp. OAS795 0.30 ABID97_RS08635 aspartate aminotransferase family protein 0.76 ABID97_RS21670 argininosuccinate synthase
Bifidobacterium breve UCC2003 0.28 BBR_RS13900 acetylornithine transaminase 0.11 BBR_RS13915 argininosuccinate synthase 0.75 4

Not shown: 23 genomes with orthologs for b3359 only; 21 genomes with orthologs for b3172 only