Conservation of cofitness between b1033 and b2844 in Escherichia coli BW25113

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1033 ycdW putative dehydrogenase (VIMSS) 1.0 b2844 yqeF putative acyltransferase (VIMSS) 0.20 7
Escherichia coli ECOR27 1.00 NOLOHH_21410 ghrA glyoxylate/hydroxypyruvate reductase GhrA 1.00 NOLOHH_11800 yqeF putative acetyl-CoA acetyltransferase low > 57
Escherichia coli ECRC62 1.00 BNILDI_19570 ghrA glyoxylate/hydroxypyruvate reductase GhrA 1.00 BNILDI_10280 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02633 Glyoxylate/hydroxypyruvate reductase A 1.00 OHPLBJKB_00885 Acetyl-CoA acetyltransferase low > 73
Escherichia coli BL21 1.00 ECD_01030 glyoxylate/hydroxypyruvate reductase A 1.00 ECD_02692 short chain acyltransferase — —
Escherichia coli ECRC98 0.99 JDDGAC_07540 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 JDDGAC_23580 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS06000 glyoxylate/hydroxypyruvate reductase GhrA 0.99 ECOLIN_RS15960 acetyl-CoA C-acetyltransferase — —
Escherichia coli ECRC101 0.99 OKFHMN_03880 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 OKFHMN_19915 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia fergusonii Becca 0.99 EFB2_02940 Glyoxylate/hydroxypyruvate reductase A 0.99 EFB2_01039 Acetyl-CoA acetyltransferase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_23875 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 KEDOAH_08215 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli ECRC101 0.99 MCAODC_23240 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 MCAODC_10440 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli ECRC102 0.99 NIAGMN_23950 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 NIAGMN_17685 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli ECOR38 0.98 HEPCGN_23610 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 HEPCGN_19595 yqeF putative acetyl-CoA acetyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF3313 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.91 GFF1330 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 78
Enterobacter asburiae PDN3 0.78 EX28DRAFT_1896 Phosphoglycerate dehydrogenase and related dehydrogenases 0.89 EX28DRAFT_2923 acetyl-CoA acetyltransferases low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A 0.89 MPMX20_03719 Acetyl-CoA acetyltransferase low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS10890 glyoxylate/hydroxypyruvate reductase A 0.87 BWI76_RS23445 acetyl-CoA acetyltransferase low > 92
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS00950 glyoxylate reductase 0.65 RR42_RS26090 acetyl-CoA acetyltransferase low > 128
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS01065 glyoxylate/hydroxypyruvate reductase A 0.62 QEN71_RS22200 acetyl-CoA C-acetyltransferase low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_000574 glyoxylate/hydroxypyruvate reductase A 0.61 ABIE53_002065 acetyl-CoA C-acetyltransferase low > 113
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS02135 glyoxylate reductase 0.62 BPHYT_RS09150 acetyl-CoA acetyltransferase low > 109
Ralstonia solanacearum PSI07 0.46 RPSI07_RS22875 glyoxylate/hydroxypyruvate reductase A 0.58 RPSI07_RS15990 acetyl-CoA C-acetyltransferase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_02100 glyoxylate/hydroxypyruvate reductase A 0.61 H281DRAFT_00852 acetyl-CoA acetyltransferase low > 103
Ralstonia solanacearum GMI1000 0.43 RS_RS01285 glyoxylate/hydroxypyruvate reductase A 0.60 RS_RS08225 acetyl-CoA C-acetyltransferase low > 80
Ralstonia solanacearum UW163 0.43 UW163_RS03140 glyoxylate/hydroxypyruvate reductase A 0.58 UW163_RS14810 acetyl-CoA C-acetyltransferase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS10440 glyoxylate/hydroxypyruvate reductase A 0.58 RALBFv3_RS01500 acetyl-CoA C-acetyltransferase low > 76
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS06255 glyoxylate/hydroxypyruvate reductase A 0.58 ABZR87_RS13295 acetyl-CoA C-acetyltransferase low > 80
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.57 Ac3H11_2303 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1710 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.61 GFF4796 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 90
Variovorax sp. OAS795 0.39 ABID97_RS25105 glyoxylate/hydroxypyruvate reductase A 0.60 ABID97_RS12420 acetyl-CoA C-acetyltransferase — —
Variovorax sp. SCN45 0.38 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.60 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 127
Azospirillum sp. SherDot2 0.38 MPMX19_00078 Glyoxylate/hydroxypyruvate reductase A 0.56 MPMX19_03465 Acetyl-CoA acetyltransferase low > 112
Marinobacter adhaerens HP15 0.35 HP15_3938 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.63 HP15_5 acetyl-CoA acetyltransferase low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_03335 glyoxylate/hydroxypyruvate reductase A 0.43 CA264_11830 acetyl-CoA acetyltransferase low > 74
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_4909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.68 Pf1N1B4_5835 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_28220 hydroxyacid dehydrogenase 0.69 AO353_27945 acetyl-CoA acetyltransferase low > 101
Rhodospirillum rubrum S1H 0.32 Rru_A2002 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (NCBI) 0.59 Rru_A0274 Acetyl-CoA C-acetyltransferase (NCBI) low > 58
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.69 PFLU_RS10575 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.69 PFLU_RS10575 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.69 Psyr_0824 acetyl-CoA acetyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.69 Psyr_0824 acetyl-CoA acetyltransferase low > 86
Bosea sp. OAE506 0.31 ABIE41_RS12100 glyoxylate/hydroxypyruvate reductase A 0.56 ABIE41_RS08710 acetyl-CoA C-acetyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_26720 hydroxyacid dehydrogenase 0.68 AO356_21640 acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_372 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.68 Pf6N2E2_2113 Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 103
Lysobacter sp. OAE881 0.30 ABIE51_RS10035 glyoxylate/hydroxypyruvate reductase A 0.42 ABIE51_RS13145 acetyl-CoA C-acyltransferase low > 62
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS05655 D-2-hydroxyacid dehydrogenase 0.62 HSERO_RS01180 acetyl-CoA acetyltransferase low > 78
Pseudomonas stutzeri RCH2 0.27 Psest_2788 Phosphoglycerate dehydrogenase and related dehydrogenases 0.65 Psest_1076 acetyl-CoA acetyltransferases low > 67
Rhizobium sp. OAE497 0.27 ABIE40_RS00635 glyoxylate/hydroxypyruvate reductase A 0.54 ABIE40_RS18690 acetyl-CoA C-acetyltransferase 0.49 8
Dinoroseobacter shibae DFL-12 0.24 Dshi_0590 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) 0.54 Dshi_3066 acetyl-CoA acetyltransferase (RefSeq) low > 64

Not shown: 11 genomes with orthologs for b1033 only; 22 genomes with orthologs for b2844 only