| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A1263 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 1.0 | Rru_A3530 | | DNA-directed DNA polymerase (NCBI) | 0.51 | 9 |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_3142 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.36 | Dshi_0385 | | DNA-directed DNA polymerase (RefSeq) | low | > 64 |
| Pseudomonas sp. RS175 | 0.32 | PFR28_01711 | | Diacetylchitobiose uptake system permease protein DasC | 0.24 | PFR28_00492 | | DNA polymerase IV | low | > 88 |
| Pseudomonas simiae WCS417 | 0.32 | PS417_12705 | | ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) | 0.25 | PS417_22830 | | DNA polymerase IV | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS13395 | | carbohydrate ABC transporter permease | 0.25 | PFLU_RS24490 | | DNA polymerase IV | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_27680 | | sugar ABC transporter permease | 0.24 | AO356_05570 | | DNA polymerase IV | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS13395 | | carbohydrate ABC transporter permease | 0.25 | PFLU_RS24490 | | DNA polymerase IV | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_808 | | Various polyols ABC transporter, permease component 2 | 0.24 | Pf6N2E2_2974 | | DNA polymerase IV (EC 2.7.7.7) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_4848 | | Various polyols ABC transporter, permease component 2 | 0.24 | Pf1N1B4_3165 | | DNA polymerase IV (EC 2.7.7.7) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_25890 | | sugar ABC transporter permease | 0.25 | AO353_16910 | | DNA polymerase IV | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.31 | Psyr_2438 | | sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein | 0.25 | Psyr_1397 | | DNA-directed DNA polymerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.31 | Psyr_2438 | | sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein | 0.25 | Psyr_1397 | | DNA-directed DNA polymerase | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c16690 | | binding protein-dependent transport system, inner membrane component | 0.35 | PGA1_c32470 | | DNA polymerase IV | low | > 62 |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS17005 | | carbohydrate ABC transporter permease | 0.46 | ABIE40_RS07310 | | DNA polymerase IV | low | > 107 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_03650 | | Diacetylchitobiose uptake system permease protein NgcG | 0.41 | MPMX19_05504 | | DNA polymerase IV | low | > 112 |
| Sinorhizobium meliloti 1021 | 0.27 | SM_b21105 | | ABC transporter for L-Fucose, permease component 2 (from data) | 0.47 | SMc01373 | | DNA polymerase IV | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS10190 | | carbohydrate ABC transporter permease | 0.23 | QEN71_RS08870 | | DNA polymerase IV | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_004522 | | glycerol transport system permease protein | 0.23 | ABIE53_005211 | | DNA polymerase-4 | low | > 113 |
| Pantoea sp. MT58 | 0.26 | IAI47_20090 | | carbohydrate ABC transporter permease | 0.25 | IAI47_15175 | | DNA polymerase IV | low | > 76 |
| Rahnella sp. WP5 | 0.26 | EX31_RS07055 | | carbohydrate ABC transporter permease | 0.25 | EX31_RS21005 | | DNA polymerase IV | low | > 89 |
| Serratia liquefaciens MT49 | 0.25 | IAI46_11760 | | carbohydrate ABC transporter permease | 0.24 | IAI46_04405 | | DNA polymerase IV | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS04860 | | sugar ABC transporter permease | 0.21 | HSERO_RS21635 | | DNA-directed DNA polymerase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS33285 | | sugar ABC transporter permease | 0.22 | BPHYT_RS01275 | | DNA-directed DNA polymerase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.25 | GFF2812 | | Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) | 0.24 | GFF728 | | DNA polymerase IV (EC 2.7.7.7) | low | > 90 |
| Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS07380 | | carbohydrate ABC transporter permease | 0.26 | RALBFv3_RS01730 | | DNA polymerase IV | low | > 76 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_15595 | | maltose ABC transporter permease | 0.25 | BNILDI_00290 | dinB | DNA polymerase IV | low | > 75 |
| Ralstonia solanacearum UW163 | 0.24 | UW163_RS06240 | | carbohydrate ABC transporter permease | 0.26 | UW163_RS15040 | | DNA polymerase IV | — | — |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS08840 | | carbohydrate ABC transporter permease | 0.44 | ABIE41_RS18185 | | DNA polymerase IV | low | > 77 |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_16805 | | maltose ABC transporter permease | 0.25 | NOLOHH_02095 | dinB | DNA polymerase IV | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.24 | RS_RS10740 | | carbohydrate ABC transporter permease | 0.27 | RS_RS07995 | | DNA polymerase IV | low | > 80 |
| Pseudomonas putida KT2440 | 0.24 | PP_2263 | | Sugar ABC transporter, permease protein | 0.24 | PP_1203 | | DNA polymerase IV | low | > 96 |
| Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS13775 | | sugar ABC transporter permease | 0.23 | RR42_RS08990 | | DNA polymerase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.24 | ABZR87_RS18680 | | carbohydrate ABC transporter permease | 0.26 | ABZR87_RS13550 | | DNA polymerase IV | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS09865 | | carbohydrate ABC transporter permease | 0.26 | RPSI07_RS15755 | | DNA polymerase IV | low | > 81 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_007170 | | carbohydrate ABC transporter permease | 0.43 | TX73_016210 | | DNA polymerase IV | low | > 86 |
| Acidovorax sp. GW101-3H11 | 0.23 | Ac3H11_794 | | ABC transporter for Glycerol, permease component 2 (from data) | 0.23 | Ac3H11_1600 | | DNA polymerase IV (EC 2.7.7.7) | low | > 79 |
| Klebsiella michiganensis M5al | 0.22 | BWI76_RS03240 | | maltodextrin ABC transporter permease | 0.24 | BWI76_RS05530 | | DNA polymerase IV | low | > 92 |
| Pseudomonas stutzeri RCH2 | 0.19 | Psest_0865 | | maltose ABC transporter, permease component 2 (MalG) (from data) | 0.26 | Psest_1304 | | Nucleotidyltransferase/DNA polymerase involved in DNA repair | low | > 67 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF1402 | | Maltose/maltodextrin ABC transporter, permease protein MalG | 0.24 | GFF4104 | | DNA polymerase IV (EC 2.7.7.7) | low | > 78 |
Not shown: 10 genomes with orthologs for Rru_A1263 only; 36 genomes with orthologs for Rru_A3530 only