| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A2946 | | DNA mismatch repair protein (NCBI) | 1.0 | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | 0.70 | 3 |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_01619 | | DNA mismatch repair protein MutL | 0.59 | MPMX19_04419 | | Periplasmic dipeptide transport protein | 0.34 | 48 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS05025 | | DNA mismatch repair protein MutL | 0.64 | AZOBR_RS21760 | | peptide ABC transporter substrate-binding protein | low | > 97 |
| Phaeobacter inhibens DSM 17395 | 0.51 | PGA1_c32740 | | DNA mismatch repair protein MutL | 0.15 | PGA1_c32060 | | glutathione-binding protein GsiB | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.49 | Dshi_0363 | | DNA mismatch repair protein MutL (RefSeq) | 0.11 | Dshi_2595 | | extracellular solute-binding protein family 5 (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.48 | Atu0699 | | DNA mismatch repair protein MutL | 0.57 | Atu4113 | | dipeptide ABC transporter substrate-binding protein | 0.26 | 61 |
| Sinorhizobium meliloti 1021 | 0.47 | SMc00932 | | DNA mismatch repair protein | 0.60 | SMc00786 | | periplasmic dipeptide-binding protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS05235 | | DNA mismatch repair endonuclease MutL | 0.59 | ABIE40_RS03345 | | ABC transporter substrate-binding protein | low | > 107 |
| Pseudomonas putida KT2440 | 0.38 | PP_4896 | | DNA mismatch repair protein MutL | 0.55 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.55 | PFLU_RS04125 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.55 | PFLU_RS04125 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_02480 | | DNA mismatch repair protein | 0.55 | PS417_04085 | | peptide ABC transporter substrate-binding protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_3616 | | DNA mismatch repair protein MutL | 0.54 | Pf6N2E2_3307 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_09480 | | DNA mismatch repair protein MutL | 0.55 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_13135 | | DNA mismatch repair protein | 0.55 | AO353_05370 | | peptide ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_1414 | | DNA mismatch repair protein MutL | 0.53 | Pf1N1B4_1120 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.55 | Psyr_4235 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.55 | Psyr_4235 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_08665 | | DNA mismatch repair protein | 0.53 | AO356_07240 | | peptide ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_05119 | | DNA mismatch repair protein MutL | 0.53 | PFR28_00132 | | Periplasmic dipeptide transport protein | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_156 | | DNA mismatch repair protein MutL | 0.53 | PfGW456L13_5051 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 87 |
| Paraburkholderia graminis OAS925 | 0.35 | ABIE53_000877 | | DNA mismatch repair protein MutL | 0.51 | ABIE53_003951 | | dipeptide transport system substrate-binding protein | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS04190 | | DNA mismatch repair protein | 0.13 | HSERO_RS09195 | | glutathione ABC transporter substrate-binding protein GsiB | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS08785 | | DNA mismatch repair endonuclease MutL | 0.17 | ABCV34_RS13515 | | glutathione ABC transporter substrate-binding protein GsiB | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_04712 | | DNA mismatch repair protein MutL | 0.56 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS26435 | | DNA mismatch repair endonuclease MutL | 0.57 | QEN71_RS28705 | | ABC transporter substrate-binding protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.33 | BPHYT_RS03650 | | DNA mismatch repair protein | 0.55 | BPHYT_RS18690 | | ABC transporter | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS00870 | | DNA mismatch repair endonuclease MutL | 0.15 | ABZR87_RS14300 | | ABC transporter substrate-binding protein | low | > 80 |
| Variovorax sp. SCN45 | 0.32 | GFF4800 | | DNA mismatch repair protein MutL | 0.61 | GFF7288 | | Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) | low | > 127 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS20310 | | DNA mismatch repair endonuclease MutL | 0.60 | ABID97_RS04470 | | ABC transporter substrate-binding protein | low | > 91 |
| Vibrio cholerae E7946 ATCC 55056 | 0.24 | CSW01_01825 | | DNA mismatch repair protein MutL | 0.31 | CSW01_08445 | | ABC transporter substrate-binding protein | low | > 62 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_01615 | | DNA mismatch repair endonuclease MutL | 0.64 | IAI46_00475 | | ABC transporter substrate-binding protein | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_1950 | | DNA mismatch repair protein MutL | 0.47 | B158DRAFT_1047 | | ABC-type dipeptide transport system, periplasmic component | low | > 40 |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_12265 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 80 |
| Pantoea sp. MT58 | 0.23 | IAI47_02580 | | DNA mismatch repair endonuclease MutL | 0.66 | IAI47_18650 | | ABC transporter substrate-binding protein | low | > 76 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_02780 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 87 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_15890 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | — | — |
| Escherichia fergusonii Becca | 0.23 | EFB2_04365 | | DNA mismatch repair protein MutL | 0.63 | EFB2_00263 | | Periplasmic dipeptide transport protein | low | > 86 |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_10115 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | — | — |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_15905 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 86 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_10495 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 87 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_04530 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 75 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_06960 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | low | > 75 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS24220 | | DNA mismatch repair endonuclease MutL | 0.63 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | low | > 55 |
| Escherichia coli BW25113 | 0.23 | b4170 | mutL | DNA mismatch repair protein (NCBI) | 0.63 | b3544 | dppA | dipeptide transporter (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_03872 | | DNA mismatch repair protein MutL | 0.63 | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | low | > 73 |
| Escherichia coli BL21 | 0.23 | ECD_04037 | | methyl-directed mismatch repair protein | 0.63 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | low | > 61 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS02525 | | DNA mismatch repair protein MutL | 0.63 | BWI76_RS26885 | | ABC transporter substrate-binding protein | low | > 92 |
| Fusobacterium nucleatum SB010 | 0.22 | HUW76_07720 | | DNA mismatch repair endonuclease MutL | 0.22 | HUW76_05125 | | ABC transporter substrate-binding protein | low | > 35 |
| Dickeya dianthicola ME23 | 0.22 | DZA65_RS19690 | | DNA mismatch repair endonuclease MutL | 0.65 | DZA65_RS21920 | | ABC transporter substrate-binding protein | low | > 75 |
| Enterobacter asburiae PDN3 | 0.22 | EX28DRAFT_3367 | | DNA mismatch repair protein MutL | 0.63 | EX28DRAFT_3804 | | ABC-type dipeptide transport system, periplasmic component | low | > 76 |
| Dickeya dianthicola 67-19 | 0.22 | HGI48_RS18555 | | DNA mismatch repair endonuclease MutL | 0.65 | HGI48_RS20925 | | ABC transporter substrate-binding protein | low | > 71 |
| Enterobacter sp. TBS_079 | 0.22 | MPMX20_00451 | | DNA mismatch repair protein MutL | 0.64 | MPMX20_00190 | | Periplasmic dipeptide transport protein | low | > 85 |
| Acidovorax sp. GW101-3H11 | 0.12 | Ac3H11_313 | | DNA mismatch repair protein MutL | 0.15 | Ac3H11_4823 | | Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein | low | > 79 |