| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A2008 | | Thiamine biosynthesis protein ThiC (NCBI) | 1.0 | Rru_A2088 | | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) | 0.72 | 7 |
| Agrobacterium fabrum C58 | 0.65 | Atu2569 | | thiamine biosynthesis protein | 0.27 | Atu4281 | | amino acid ABC transporter permease | low | > 89 |
| Pseudomonas putida KT2440 | 0.63 | PP_4922 | | Phosphomethylpyrimidine synthase | 0.49 | PP_1070 | | glutamate / aspartate ABC transporter - permease subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_3644 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.50 | Pf6N2E2_5569 | | Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.63 | OH686_15885 | | phosphomethylpyrimidine synthase | 0.49 | OH686_13345 | | Glutamate/aspartate ABC transporter, permease protein GltJ | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_08810 | | thiamine biosynthesis protein ThiC | 0.52 | AO356_18225 | | amino acid ABC transporter permease | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.53 | Psyr_3909 | | L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein | low | > 86 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_05091 | | Phosphomethylpyrimidine synthase | 0.49 | PFR28_03372 | | Glutamate/aspartate import permease protein GltJ | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.53 | Psyr_3909 | | L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.52 | PFLU_RS05640 | | amino acid ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.52 | PFLU_RS05640 | | amino acid ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_13010 | | thiamine biosynthesis protein ThiC | 0.50 | AO353_16285 | | ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) | low | > 101 |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_2027 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.39 | Ac3H11_1956 | | Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) | low | > 79 |
| Pseudomonas simiae WCS417 | 0.62 | PS417_02355 | | thiamine biosynthesis protein ThiC | 0.52 | PS417_05555 | | amino acid ABC transporter permease | low | > 88 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.62 | GFF4626 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.39 | GFF520 | | Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) | low | > 90 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_1447 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.49 | Pf1N1B4_772 | | ABC transporter for L-asparagine and L-glutamate, permease component 1 (from data) | low | > 87 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS10825 | | phosphomethylpyrimidine synthase ThiC | 0.56 | ABCV34_RS14435 | | amino acid ABC transporter permease | low | > 48 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_187 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.50 | PfGW456L13_4771 | | ABC transporter for L-Asparagine and possibly other L-amino acids, permease component 1 (from data) | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS20380 | | phosphomethylpyrimidine synthase ThiC | 0.51 | HER17_RS15195 | | amino acid ABC transporter permease | low | > 75 |
| Dechlorosoma suillum PS | 0.61 | Dsui_0422 | | thiamine biosynthesis protein ThiC | 0.55 | Dsui_0636 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | — | — |
| Enterobacter sp. TBS_079 | 0.61 | MPMX20_00217 | | Phosphomethylpyrimidine synthase | 0.50 | MPMX20_01305 | | Glutamate/aspartate import permease protein GltJ | low | > 85 |
| Escherichia coli Nissle 1917 | 0.61 | ECOLIN_RS23040 | | phosphomethylpyrimidine synthase ThiC | 0.50 | ECOLIN_RS03520 | | glutamate/aspartate ABC transporter permease GltJ | low | > 55 |
| Enterobacter asburiae PDN3 | 0.61 | EX28DRAFT_4536 | | phosphomethylpyrimidine synthase | 0.50 | EX28DRAFT_2317 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 76 |
| Escherichia fergusonii Becca | 0.61 | EFB2_04617 | | Phosphomethylpyrimidine synthase | 0.50 | EFB2_03445 | | Glutamate/aspartate import permease protein GltJ | low | > 86 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS01175 | | phosphomethylpyrimidine synthase ThiC | 0.52 | DDA3937_RS06220 | | amino acid ABC transporter permease | low | > 74 |
| Rahnella sp. WP5 | 0.61 | EX31_RS16815 | | phosphomethylpyrimidine synthase ThiC | 0.51 | EX31_RS23170 | | amino acid ABC transporter permease | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS02120 | | phosphomethylpyrimidine synthase ThiC | 0.58 | HSERO_RS19250 | | glutamate ABC transporter permease | low | > 78 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_03875 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | MCAODC_26475 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 87 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_14785 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | KEDOAH_20710 | gltJ | glutamate/aspartate ABC transporter permease GltJ | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_11125 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | NIAGMN_05315 | gltJ | glutamate/aspartate ABC transporter permease GltJ | — | — |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_17000 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | JDDGAC_10905 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 86 |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_13375 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | OKFHMN_07260 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 80 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF4198 | | Thiamin biosynthesis protein ThiC | 0.51 | GFF4572 | | Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) | low | > 78 |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_05520 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | NOLOHH_23645 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 75 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_00395 | | hydroxymethylpyrimidine synthase | 0.52 | H281DRAFT_04269 | | L-glutamate ABC transporter membrane protein /L-aspartate ABC transporter membrane protein | low | > 103 |
| Acinetobacter radioresistens SK82 | 0.61 | MPMX26_00180 | | Phosphomethylpyrimidine synthase | 0.49 | MPMX26_00677 | | Glutamate/aspartate import permease protein GltJ | low | > 36 |
| Escherichia coli BW25113 | 0.61 | b3994 | thiC | thiamine biosynthesis protein ThiC (NCBI) | 0.50 | b0654 | gltJ | glutamate and aspartate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.61 | BNILDI_06005 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | BNILDI_21655 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_04056 | | Phosphomethylpyrimidine synthase | 0.50 | OHPLBJKB_03059 | | putative glutamine ABC transporter permease protein GlnM | low | > 73 |
| Escherichia coli BL21 | 0.61 | ECD_03871 | | phosphomethylpyrimidine synthase | 0.50 | ECD_00622 | | glutamate/aspartate ABC transporter permease | low | > 61 |
| Escherichia coli ECOR38 | 0.61 | HEPCGN_12010 | thiC | phosphomethylpyrimidine synthase ThiC | 0.50 | HEPCGN_00970 | gltJ | glutamate/aspartate ABC transporter permease GltJ | low | > 87 |
| Pantoea sp. MT58 | 0.61 | IAI47_18085 | | phosphomethylpyrimidine synthase ThiC | 0.49 | IAI47_13975 | | amino acid ABC transporter permease | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS05480 | | phosphomethylpyrimidine synthase ThiC | 0.53 | QEN71_RS26880 | | amino acid ABC transporter permease | low | > 153 |
| Serratia liquefaciens MT49 | 0.61 | IAI46_01320 | | phosphomethylpyrimidine synthase ThiC | 0.51 | IAI46_05990 | | amino acid ABC transporter permease | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS13220 | | phosphomethylpyrimidine synthase | 0.51 | BPHYT_RS16695 | | glutamate/aspartate ABC transporter permease GltJ | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.60 | ABIE53_002857 | | phosphomethylpyrimidine synthase | 0.52 | ABIE53_003509 | | glutamate/aspartate transport system permease protein | low | > 113 |
| Dickeya dianthicola 67-19 | 0.60 | HGI48_RS01170 | | phosphomethylpyrimidine synthase ThiC | 0.52 | HGI48_RS06265 | | amino acid ABC transporter permease | low | > 71 |
| Klebsiella michiganensis M5al | 0.60 | BWI76_RS01555 | | phosphomethylpyrimidine synthase ThiC | 0.50 | BWI76_RS08105 | | glutamate/aspartate ABC transporter permease GltJ | low | > 92 |
| Dickeya dianthicola ME23 | 0.60 | DZA65_RS01215 | | phosphomethylpyrimidine synthase ThiC | 0.52 | DZA65_RS06610 | | amino acid ABC transporter permease | low | > 75 |
| Variovorax sp. SCN45 | 0.60 | GFF2000 | | Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) | 0.52 | GFF4089 | | Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) | low | > 127 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS25235 | | phosphomethylpyrimidine synthase ThiC | 0.40 | ABID97_RS05940 | | amino acid ABC transporter permease | low | > 91 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS03640 | | phosphomethylpyrimidine synthase ThiC | 0.53 | UW163_RS02025 | | amino acid ABC transporter permease | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS09940 | | phosphomethylpyrimidine synthase ThiC | 0.53 | RALBFv3_RS11560 | | amino acid ABC transporter permease | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS04785 | | phosphomethylpyrimidine synthase ThiC | 0.52 | ABZR87_RS07525 | | amino acid ABC transporter permease | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS23420 | | phosphomethylpyrimidine synthase ThiC | 0.53 | RPSI07_RS21650 | | amino acid ABC transporter permease | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS00555 | | phosphomethylpyrimidine synthase | 0.54 | RS_RS02390 | | amino acid ABC transporter permease | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS01290 | | thiamine biosynthesis protein ThiC | 0.52 | RR42_RS02580 | | amino acid ABC transporter permease | low | > 128 |
Not shown: 37 genomes with orthologs for Rru_A2008 only; 2 genomes with orthologs for Rru_A2088 only