| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | 1.0 | Rru_A1357 | | Transaldolase AB (NCBI) | 0.77 | 11 |
| Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS03985 | | LysR family transcriptional regulator | 0.51 | RPSI07_RS18015 | | transaldolase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.47 | RS_RS21490 | | LysR family transcriptional regulator | 0.52 | RS_RS06170 | | transaldolase | low | > 80 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_09485 | | LysR family transcriptional regulator | 0.52 | PS417_07730 | | transaldolase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_01425 | | LysR family transcriptional regulator | 0.48 | AO356_02175 | | transaldolase | low | > 104 |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS06790 | | LysR family transcriptional regulator | 0.49 | QEN71_RS24595 | | transaldolase | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS15205 | | LysR family transcriptional regulator | 0.51 | HSERO_RS05500 | | transaldolase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS33825 | | LysR family transcriptional regulator | 0.53 | RR42_RS13050 | | transaldolase | low | > 128 |
| Pseudomonas fluorescens FW300-N2E3 | 0.38 | AO353_19415 | | LysR family transcriptional regulator | 0.50 | AO353_00310 | | transaldolase | low | > 101 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS03475 | | LysR family transcriptional regulator | 0.54 | ABIE40_RS16940 | | transaldolase | — | — |
| Agrobacterium fabrum C58 | 0.38 | Atu4291 | | LysR family transcriptional regulator | 0.54 | Atu4464 | | transaldolase B | — | — |
| Rahnella sp. WP5 | 0.38 | EX31_RS16730 | | LysR family transcriptional regulator | 0.50 | EX31_RS20280 | | transaldolase | low | > 89 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | 0.49 | ABIE53_001416 | | transaldolase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.37 | BPHYT_RS26820 | | LysR family transcriptional regulator | 0.49 | BPHYT_RS06045 | | transaldolase | low | > 109 |
| Shewanella loihica PV-4 | 0.37 | Shew_1128 | | LysR family transcriptional regulator (RefSeq) | 0.50 | Shew_1089 | | transaldolase B (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.37 | SO3363 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.51 | SO3546 | tal | transaldolase (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_1186 | | LysR family transcriptional regulator (RefSeq) | 0.50 | Shewana3_3147 | | transaldolase B (RefSeq) | — | — |
| Enterobacter sp. TBS_079 | 0.37 | MPMX20_02183 | | HTH-type transcriptional regulator DmlR | 0.50 | MPMX20_03325 | | Transaldolase | low | > 85 |
| Shewanella amazonensis SB2B | 0.37 | Sama_2485 | | LysR family transcriptional regulator (RefSeq) | 0.51 | Sama_0913 | | transaldolase B (RefSeq) | — | — |
| Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS12055 | | LysR family transcriptional regulator | 0.52 | PFLU_RS07805 | | transaldolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS12055 | | LysR family transcriptional regulator | 0.52 | PFLU_RS07805 | | transaldolase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS10340 | | LysR family transcriptional regulator | 0.53 | ABZR87_RS11000 | | transaldolase | low | > 80 |
| Pseudomonas sp. S08-1 | 0.36 | OH686_18575 | | Transcriptional regulator, LysR family | 0.50 | OH686_22740 | | transaldolase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_1182 | | Transcriptional regulator | 0.52 | Psest_2708 | | transaldolase | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | 0.48 | Ac3H11_2059 | | Transaldolase (EC 2.2.1.2) | low | > 79 |
| Pseudomonas putida KT2440 | 0.36 | PP_2961 | | Transcriptional regulator, LysR family | 0.52 | PP_2168 | | Transaldolase | low | > 96 |
| Dickeya dadantii 3937 | 0.35 | DDA3937_RS03165 | | LysR family transcriptional regulator | 0.50 | DDA3937_RS04350 | | transaldolase | low | > 74 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS28680 | | LysR family transcriptional regulator | 0.47 | ABID97_RS07095 | | transaldolase | low | > 91 |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS13930 | | putative LysR-family transcriptional regulator | 0.49 | BWI76_RS04270 | | transaldolase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.34 | EX28DRAFT_1365 | | Transcriptional regulator | 0.50 | EX28DRAFT_0197 | | transaldolase | low | > 76 |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS15410 | | LysR family transcriptional regulator | 0.54 | ABZR86_RS12545 | | transaldolase | low | > 74 |
| Pantoea sp. MT58 | 0.33 | IAI47_20580 | | LysR family transcriptional regulator | 0.50 | IAI47_16195 | | transaldolase | low | > 76 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS19010 | | LysR family transcriptional regulator | 0.50 | HGI48_RS18325 | | transaldolase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.32 | HER17_RS06865 | | LysR family transcriptional regulator | 0.51 | HER17_RS17320 | | transaldolase | low | > 75 |
| Escherichia coli ECRC62 | 0.32 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | BNILDI_12490 | tal | transaldolase | low | > 75 |
| Escherichia coli BW25113 | 0.32 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | 0.50 | b2464 | talA | transaldolase A (NCBI) | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.32 | CSW01_09770 | | LysR family transcriptional regulator | 0.50 | CSW01_17325 | | transaldolase | low | > 62 |
| Escherichia coli BL21 | 0.32 | ECD_00201 | | LysR family putative transcriptional regulator | 0.50 | ECD_02355 | | transaldolase A | low | > 61 |
| Escherichia coli ECRC100 | 0.32 | OKFHMN_10000 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | OKFHMN_22000 | tal | transaldolase | low | > 80 |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_18155 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | KEDOAH_06220 | tal | transaldolase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | 0.50 | OHPLBJKB_01267 | | Transaldolase | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF4039 | | LysR family transcriptional regulator YafC | 0.49 | GFF1083 | | Transaldolase (EC 2.2.1.2) | low | > 78 |
| Escherichia coli ECOR38 | 0.32 | HEPCGN_07940 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | HEPCGN_21170 | tal | transaldolase | low | > 87 |
| Escherichia coli ECRC101 | 0.32 | MCAODC_00515 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | MCAODC_12530 | tal | transaldolase | low | > 87 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_13595 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | JDDGAC_25945 | tal | transaldolase | low | > 86 |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_07850 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | NIAGMN_19770 | tal | transaldolase | — | — |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | 0.50 | NOLOHH_13680 | tal | transaldolase | low | > 75 |
| Escherichia fergusonii Becca | 0.31 | EFB2_03835 | | HTH-type transcriptional regulator DmlR | 0.50 | EFB2_01424 | | Transaldolase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS01140 | | DNA-binding transcriptional regulator YafC | 0.50 | ECOLIN_RS14060 | | transaldolase | low | > 55 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_01513 | | HTH-type transcriptional regulator DmlR | 0.42 | MPMX26_01753 | | Transaldolase | — | — |
| Erwinia tracheiphila SCR3 | 0.27 | LU632_RS23365 | | LysR family transcriptional regulator | 0.50 | LU632_RS06725 | tal | transaldolase | low | > 74 |