Homologs of Xcc-8004.3163.1 from Xanthomonas campestris pv. campestris strain 8004

Radical SAM domain protein
SEED: Radical SAM domain protein
KEGG: anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase

55 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3163.1 Radical SAM domain protein insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS04875 radical SAM protein insig. 72 82
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05095 B12-binding domain-containing radical SAM protein insig. 72 82
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS04680 radical SAM protein insig. 70 82
o Rhodanobacter sp. FW510-T8 OKGIIK_14675 Mg-protoporphyrin IX monomethyl ester oxidative cyclase insig. 70 81
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS00545 B12-binding domain-containing radical SAM protein insig. 69 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04385 radical SAM protein insig. 47 74
  Desulfovibrio vulgaris Hildenborough JW710 DVU3016 B12 binding domain protein/radical SAM domain protein (TIGR) insig. 25 63
  Rhodospirillum rubrum S1H Rru_A0762 Fe-S oxidoreductase (NCBI) insig. 27 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13125 B12-binding domain-containing radical SAM protein insig. 24 65
  Magnetospirillum magneticum AMB-1 AMB_RS00595 B12-binding domain-containing radical SAM protein cofit 27 37
  Magnetospirillum magneticum AMB-1 AMB_RS04045 B12-binding domain-containing radical SAM protein cofit 28 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU3019 radical SAM/B12 binding domain protein (TIGR) sig. 25 64
  Methanococcus maripaludis JJ MMJJ_RS07390 TIGR04014 family B12-binding domain/radical SAM domain-containing protein sig. 22 63
  Methanococcus maripaludis S2 MMP_RS06965 TIGR04014 family B12-binding domain/radical SAM domain-containing protein strong 23 51
  Cupriavidus basilensis FW507-4G11 RR42_RS35285 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 28 45
  Rhodospirillum rubrum S1H Rru_A3548 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) strong 26 47
  Synechococcus elongatus PCC 7942 Synpcc7942_1621 Elongator protein 3/MiaB/NifB no data 24 57
  Synechocystis sp000284455 PCC 6803 SGL_RS10160 B12-binding domain-containing radical SAM protein strong 26 47
  Bosea sp. OAE506 ABIE41_RS00995 TIGR04295 family B12-binding domain-containing radical SAM protein insig. 27 50
  Azospirillum brasilense Sp245 AZOBR_RS28360 radical SAM protein insig. 25 55
  Magnetospirillum magneticum AMB-1 AMB_RS17625 hopanoid biosynthesis associated radical SAM protein HpnJ strong 31 33
  Xanthobacter sp. DMC5 GFF2683 Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase insig. 28 52
  Rhodopseudomonas palustris CGA009 TX73_008575 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase no data 23 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3316 Fe-S oxidoreductase insig. 24 34
  Paraburkholderia graminis OAS925 ABIE53_001028 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 30 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS16605 hopanoid C-3 methylase HpnR insig. 25 63
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04380 radical SAM protein insig. 28 38
  Burkholderia phytofirmans PsJN BPHYT_RS10915 radical SAM protein insig. 30 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01152 hopanoid biosynthesis associated radical SAM protein HpnJ no data 30 33
  Bosea sp. OAE506 ABIE41_RS13985 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase insig. 25 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS21480 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 30 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS35045 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 30 33
  Synechocystis sp000284455 PCC 6803 SGL_RS15935 radical SAM protein insig. 25 41
  Synechocystis sp000284455 PCC 6803 SGL_RS14820 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase insig. 23 55
  Rhizobium sp. OAE497 ABIE40_RS13920 radical SAM protein cofit 24 37
  Mycobacterium tuberculosis H37Rv Rv0213c Possible methyltransferase (methylase) insig. 26 32
  Rhizobium sp. OAE497 ABIE40_RS01955 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase insig. 26 63
  Dinoroseobacter shibae DFL-12 Dshi_2637 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (RefSeq) insig. 27 33
  Magnetospirillum magneticum AMB-1 AMB_RS00435 B12-binding domain-containing radical SAM protein cofit 25 32
  Rhodopseudomonas palustris CGA009 TX73_010390 radical SAM protein insig. 26 33
  Rhodopseudomonas palustris CGA009 TX73_018400 radical SAM protein insig. 26 55
  Magnetospirillum magneticum AMB-1 AMB_RS19185 radical SAM protein insig. 25 25
  Magnetospirillum magneticum AMB-1 AMB_RS00590 radical SAM protein cofit 34 18
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05340 B12-binding domain-containing radical SAM protein insig. 21 66
  Rhodopseudomonas palustris CGA009 TX73_012885 radical SAM protein insig. 25 37
  Synechocystis sp000284455 PCC 6803 SGL_RS12535 radical SAM protein strong 27 29
  Synechococcus elongatus PCC 7942 Synpcc7942_0799 Elongator protein 3 no data 28 24
  Rhodopseudomonas palustris CGA009 TX73_023400 radical SAM protein insig. 23 38
  Pseudomonas aeruginosa MRSN321 DY961_RS12950 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 27 34
  Pseudomonas aeruginosa PA14 IKLFDK_20540 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 27 34
  Pseudomonas aeruginosa PUPa3 DQ20_RS48275 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 27 34
  Pseudomonas sp. S08-1 OH686_22200 Fe-S oxidoreductase cofit 24 32
  Herbaspirillum seropedicae SmR1 HSERO_RS01495 Fe-S osidoreductase insig. 23 64
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00515 B12-binding domain-containing radical SAM protein insig. 26 43