Homologs of Psyr_4642 from Pseudomonas syringae pv. syringae B728a

diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SEED: sensory box/GGDEF domain/EAL domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 100 100
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 75 99
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 74 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 74 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 73 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 73 100
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 73 100
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 73 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 73 99
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 73 99
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 73 100
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 72 99
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 73 99
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 72 100
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 71 100
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 71 100
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 67 97
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 65 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 65 97
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 65 97
  Pseudomonas segetis P6 MPMX49_00863 hypothetical protein insig. 59 97
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 95
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 96
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 68
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 49 68
o Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 42 81
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 49 68
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 48 74
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 47 68
  Shewanella oneidensis MR-1 SO3389 sensory box protein (NCBI ptt file) insig. 45 71
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 67
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 96
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 48 67
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 48 66
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 48 66
  Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 49 66
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 82
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 42 83
o Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 40 84
  Pseudomonas aeruginosa MRSN321 DY961_RS21370 EAL domain-containing protein strong 42 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS37920 EAL domain-containing protein strong 42 83
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 42 82
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 45 70
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 48 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 48 66
o Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 38 96
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 48 66
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 46 68
  Shewanella loihica PV-4 Shew_0813 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 46 68
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 45 68
  Pseudomonas aeruginosa MRSN321 DY961_RS23425 morA;inference=COORDINATES cyclic di-GMP receptor MorA insig. 45 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS55890 morA;inference=COORDINATES cyclic di-GMP receptor MorA sig. 45 68
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 44 68
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 67
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 48 66
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 39 87
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 68
  Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 48 66
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 41 83
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 40 87
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 41 84
  Pseudomonas sp. DMC3 GFF4251 hypothetical protein cofit 47 68
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 70
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 44 71
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 46 68
  Pseudomonas orientalis W4I3 QF045_RS03990 EAL domain-containing protein cofit 47 66
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 46 69
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 44 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 44 68
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 47 68
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 44 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 44 68
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 44 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 44 68
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 44 68
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 35 96
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 44 68
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 44 68
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 68
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 41 82
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 44 68
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 37 87
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 43 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 43 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 44 68
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 45 66
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 41 82
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 41 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 47 66
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 80
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 83
o Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00407 hypothetical protein cofit 47 66
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 46 67
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 43 75
  Pseudomonas sp. DMC3 GFF511 hypothetical protein cofit 44 73