Homologs of PFR28_02349 from Pseudomonas sp. RS175

D-xylose-binding periplasmic protein
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: D-xylose transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. RS175 PFR28_02349 D-xylose-binding periplasmic protein cofit 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_28505 sugar ABC transporter substrate-binding protein sig. 99 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF insig. 99 100
o Pseudomonas syringae pv. syringae B728a Psyr_2884 xylose-binding protein insig. 95 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2884 xylose-binding protein insig. 95 100
o Pseudomonas fluorescens SBW25 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 95 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 95 100
o Pseudomonas simiae WCS417 PS417_10940 sugar ABC transporter substrate-binding protein insig. 95 100
o Herbaspirillum seropedicae SmR1 HSERO_RS22460 xylose ABC transporter substrate-binding protein strong 79 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein sig. 77 100
o Burkholderia phytofirmans PsJN BPHYT_RS32820 xylose ABC transporter substrate-binding protein strong 78 100
o Paraburkholderia graminis OAS925 ABIE53_004930 D-xylose transport system substrate-binding protein strong 78 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03877 xylose-binding protein insig. 78 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein cofit 76 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein insig. 71 98
o Ralstonia solanacearum GMI1000 RS_RS24945 D-xylose ABC transporter substrate-binding protein strong 71 95
o Ralstonia solanacearum PSI07 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein sig. 71 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein no data 71 95
o Ralstonia solanacearum UW163 UW163_RS16755 D-xylose ABC transporter substrate-binding protein strong 71 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS23215 D-xylose ABC transporter substrate-binding protein strong 72 92
o Serratia liquefaciens MT49 IAI46_00285 D-xylose ABC transporter substrate-binding protein insig. 64 95
o Dickeya dianthicola 67-19 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein insig. 61 98
o Dickeya dianthicola ME23 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein insig. 61 98
o Dickeya dadantii 3937 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein insig. 62 98
o Klebsiella michiganensis M5al BWI76_RS27030 D-xylose transporter subunit XylF insig. 61 98
o Pantoea sp. MT58 IAI47_00190 D-xylose ABC transporter substrate-binding protein insig. 64 92
o Enterobacter asburiae PDN3 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein insig. 63 92
o Escherichia coli ECRC101 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli ECRC101 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli ECRC102 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli ECRC98 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein no data 62 93
o Escherichia coli ECRC99 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein no data 62 93
o Rahnella sp. WP5 EX31_RS09760 D-xylose ABC transporter substrate-binding protein insig. 59 98
o Enterobacter sp. TBS_079 MPMX20_00164 D-xylose-binding periplasmic protein strong 63 92
o Escherichia coli BL21 ECD_03418 D-xylose transporter subunit cofit 62 93
o Escherichia fergusonii Becca EFB2_00241 D-xylose-binding periplasmic protein insig. 62 93
o Escherichia coli ECOR27 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein cofit 62 93
o Escherichia coli ECOR38 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli ECRC62 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00138 D-xylose-binding periplasmic protein insig. 62 93
o Escherichia coli Nissle 1917 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein insig. 62 93
o Escherichia coli BW25113 b3566 xylF D-xylose transporter subunit (NCBI) strong 62 93
o Pectobacterium carotovorum WPP14 HER17_RS21080 D-xylose ABC transporter substrate-binding protein insig. 60 97
o Variovorax sp. SCN45 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF cofit 41 98
o Rhizobium sp. OAE497 ABIE40_RS14020 D-xylose ABC transporter substrate-binding protein strong 41 99
o Variovorax sp. OAS795 ABID97_RS01175 D-xylose ABC transporter substrate-binding protein strong 39 98
o Phaeobacter inhibens DSM 17395 PGA1_262p00430 glucose transporter, periplasmic substrate-binding component (from data) strong 40 95
o Sinorhizobium meliloti 1021 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor strong 40 99
o Dinoroseobacter shibae DFL-12 Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein (from data) strong 40 86
o Agrobacterium fabrum C58 Atu3576 xylose ABC transporter substrate-binding protein sig. 42 96
o Azospirillum sp. SherDot2 MPMX19_03028 D-xylose-binding periplasmic protein insig. 43 90
  Rhizobium sp. OAE497 ABIE40_RS13950 multiple monosaccharide ABC transporter substrate-binding protein cofit 32 99
  Agrobacterium fabrum C58 Atu2348 sugar binding protein strong 35 86
  Sinorhizobium meliloti 1021 SM_b20895 sugar uptake ABC transporter substrate-binding protein precursor strong 32 99
  Azospirillum sp. SherDot2 MPMX19_06224 Multiple sugar-binding periplasmic protein SbpA insig. 32 99
o Azospirillum brasilense Sp245 AZOBR_RS31240 sugar ABC transporter substrate-binding protein insig. 32 99
o Acidovorax sp. GW101-3H11 Ac3H11_610 L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) strong 30 98
  Herbaspirillum seropedicae SmR1 HSERO_RS05190 sugar ABC transporter substrate-binding protein strong 30 97
  Variovorax sp. SCN45 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF insig. 30 98
  Variovorax sp. OAS795 ABID97_RS06840 multiple monosaccharide ABC transporter substrate-binding protein strong 30 98
  Rhizobium sp. OAE497 ABIE40_RS24360 sugar ABC transporter substrate-binding protein insig. 32 94
  Dickeya dadantii 3937 DDA3937_RS03705 substrate-binding domain-containing protein insig. 28 96
  Dickeya dianthicola 67-19 HGI48_RS03745 substrate-binding domain-containing protein insig. 28 96
  Dickeya dianthicola ME23 DZA65_RS03870 sugar ABC transporter substrate-binding protein insig. 28 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1005 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 27 83
  Pectobacterium carotovorum WPP14 HER17_RS14420 substrate-binding domain-containing protein cofit 27 96
  Pantoea sp. MT58 IAI47_07555 sugar ABC transporter substrate-binding protein insig. 29 85
  Enterobacter sp. TBS_079 MPMX20_03372 Ribose import binding protein RbsB sig. 27 95
  Enterobacter asburiae PDN3 EX28DRAFT_0150 ABC-type sugar transport system, periplasmic component insig. 26 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS35805 substrate-binding domain-containing protein insig. 31 89
  Sinorhizobium meliloti 1021 SMc02338 periplasmic binding ABC transporter protein insig. 29 86
  Klebsiella michiganensis M5al BWI76_RS07235 hypothetical protein insig. 27 94
  Agrobacterium fabrum C58 Atu1899 ABC transporter, substrate binding protein (ribose) insig. 24 78
  Pseudomonas fluorescens SBW25 PFLU_RS18175 sugar ABC transporter substrate-binding protein insig. 32 71
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18175 sugar ABC transporter substrate-binding protein insig. 32 71
  Pseudomonas simiae WCS417 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) sig. 29 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1015 Inositol transport system sugar-binding protein insig. 27 85
  Rhizobium sp. OAE497 ABIE40_RS24755 D-ribose ABC transporter substrate-binding protein insig. 30 94
  Pantoea sp. MT58 IAI47_19810 substrate-binding domain-containing protein insig. 32 65
  Pseudomonas syringae pv. syringae B728a Psyr_2569 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 29 71
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2569 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 29 71
  Rhizobium sp. OAE497 ABIE40_RS24670 D-ribose ABC transporter substrate-binding protein insig. 32 70
  Escherichia coli BL21 ECD_03960 D-allose ABC transporter periplasmic binding protein insig. 28 75
  Escherichia coli BW25113 b4088 alsB D-allose transporter subunit (NCBI) insig. 28 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS25290 substrate-binding domain-containing protein insig. 31 61
  Serratia liquefaciens MT49 IAI46_10090 sugar ABC transporter substrate-binding protein insig. 29 85
  Paraburkholderia graminis OAS925 ABIE53_001220 ribose transport system substrate-binding protein insig. 31 62
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00106 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 31 69
  Azospirillum sp. SherDot2 MPMX19_03760 Ribose import binding protein RbsB insig. 28 73
  Escherichia fergusonii Becca EFB2_04494 D-allose-binding periplasmic protein insig. 28 75
  Escherichia coli ECOR38 HEPCGN_11345 alsB D-allose transporter substrate-binding protein cofit 28 75
  Escherichia coli Nissle 1917 ECOLIN_RS23680 D-allose transporter substrate-binding protein insig. 28 75
  Escherichia coli ECOR27 NOLOHH_04975 alsB D-allose transporter substrate-binding protein insig. 28 75
  Pseudomonas syringae pv. syringae B728a Psyr_3265 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 31 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3265 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 31 86
  Pantoea sp. MT58 IAI47_11815 D-ribose ABC transporter substrate-binding protein insig. 35 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS35730 substrate-binding domain-containing protein insig. 27 86
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15440 rhizopine-binding protein insig. 26 95
  Ralstonia solanacearum UW163 UW163_RS12900 rhizopine-binding protein insig. 26 95
  Pseudomonas fluorescens SBW25 PFLU_RS11700 sugar ABC transporter substrate-binding protein insig. 29 78