Homologs of PFR28_01942 from Pseudomonas sp. RS175

HTH-type transcriptional regulator CynR
SEED: LysR family transcriptional regulator YbhD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. RS175 PFR28_01942 HTH-type transcriptional regulator CynR strong 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_28895 LysR family transcriptional regulator insig. 99 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 95 100
o Pseudomonas fluorescens SBW25 PFLU_RS14945 LysR family transcriptional regulator insig. 95 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14945 LysR family transcriptional regulator strong 95 100
o Pseudomonas putida KT2440 PP_2054 putative DNA-binding transcriptional regulator sig. 88 100
o Dickeya dadantii 3937 DDA3937_RS07805 LysR family transcriptional regulator insig. 64 99
o Azospirillum brasilense Sp245 AZOBR_RS28100 LysR family transcriptional regulator insig. 57 99
o Azospirillum sp. SherDot2 MPMX19_03557 HTH-type transcriptional regulator CynR insig. 56 99
o Acidovorax sp. GW101-3H11 Ac3H11_4371 LysR family transcriptional regulator YbhD insig. 56 98
o Agrobacterium fabrum C58 Atu4264 LysR family transcriptional regulator strong 54 99
o Escherichia coli ECOR27 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD cofit 53 99
o Escherichia coli ECRC101 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 53 99
o Escherichia coli BW25113 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) insig. 53 99
o Escherichia fergusonii Becca EFB2_03338 Hydrogen peroxide-inducible genes activator insig. 53 99
o Escherichia coli ECOR38 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD cofit 53 99
o Escherichia coli ECRC101 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 53 99
o Escherichia coli ECRC102 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 53 99
o Escherichia coli ECRC62 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 53 99
o Escherichia coli ECRC98 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 53 99
o Escherichia coli ECRC99 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 53 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator insig. 53 99
o Escherichia coli Nissle 1917 ECOLIN_RS04090 LysR family transcriptional regulator no data 53 99
o Klebsiella michiganensis M5al BWI76_RS04365 LysR family transcriptional regulator insig. 53 99
o Burkholderia phytofirmans PsJN BPHYT_RS27430 LysR family transcriptional regulator insig. 53 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS08345 LysR family transcriptional regulator insig. 53 99
o Paraburkholderia graminis OAS925 ABIE53_005445 DNA-binding transcriptional LysR family regulator insig. 52 99
  Paraburkholderia graminis OAS925 ABIE53_006109 DNA-binding transcriptional LysR family regulator insig. 51 99
o Cupriavidus basilensis FW507-4G11 RR42_RS23045 LysR family transcriptional regulator insig. 54 96
  Pseudomonas fluorescens SBW25 PFLU_RS07335 LysR family transcriptional regulator insig. 52 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07335 LysR family transcriptional regulator insig. 52 96
o Pseudomonas simiae WCS417 PS417_07220 LysR family transcriptional regulator insig. 52 96
o Pseudomonas fluorescens FW300-N2E3 AO353_26720 LysR family transcriptional regulator insig. 51 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03335 transcriptional regulator, LysR family insig. 54 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS11315 LysR family transcriptional regulator insig. 54 99
  Cupriavidus basilensis FW507-4G11 RR42_RS28580 LysR family transcriptional regulator insig. 48 100
o Pseudomonas syringae pv. syringae B728a Psyr_3165 transcriptional regulator, LysR family insig. 48 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3165 transcriptional regulator, LysR family insig. 48 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2179 LysR family transcriptional regulator YbhD insig. 48 97
o Pantoea sp. MT58 IAI47_10140 LysR family transcriptional regulator insig. 42 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS04670 LysR family transcriptional regulator insig. 48 96
  Burkholderia phytofirmans PsJN BPHYT_RS09930 LysR family transcriptional regulator insig. 45 99
o Variovorax sp. SCN45 GFF2416 Transcriptional regulator YbhD, LysR family insig. 45 99
o Enterobacter sp. TBS_079 MPMX20_02971 HTH-type transcriptional regulator CynR insig. 42 99
o Enterobacter asburiae PDN3 EX28DRAFT_0581 Transcriptional regulator insig. 41 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3058 LysR family transcriptional regulator YbhD insig. 44 97
o Herbaspirillum seropedicae SmR1 HSERO_RS12040 LysR family transcriptional regulator insig. 44 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02618 transcriptional regulator, LysR family insig. 44 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS38040 LysR family transcriptional regulator insig. 43 96
o Bosea sp. OAE506 ABIE41_RS16550 LysR family transcriptional regulator insig. 41 96
  Herbaspirillum seropedicae SmR1 HSERO_RS07340 LysR family transcriptional regulator insig. 37 98
o Rahnella sp. WP5 EX31_RS20145 LysR family transcriptional regulator insig. 39 99
  Cupriavidus basilensis FW507-4G11 RR42_RS03425 LysR family transcriptional regulator insig. 39 96
  Klebsiella michiganensis M5al BWI76_RS20610 LysR family transcriptional regulator insig. 38 97
o Sinorhizobium meliloti 1021 SM_b20123 transcriptional regulator insig. 37 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS23130 LysR family transcriptional regulator insig. 39 100
  Burkholderia phytofirmans PsJN BPHYT_RS08035 LysR family transcriptional regulator insig. 38 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS17035 LysR family transcriptional regulator insig. 37 96
o Serratia liquefaciens MT49 IAI46_18415 LysR family transcriptional regulator insig. 38 96
  Paraburkholderia graminis OAS925 ABIE53_004438 DNA-binding transcriptional LysR family regulator insig. 34 99
o Variovorax sp. OAS795 ABID97_RS05470 LysR family transcriptional regulator no data 38 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2038 LysR family transcriptional regulator YfeR insig. 36 99
  Variovorax sp. SCN45 GFF6064 Transcriptional regulator YfeR, LysR family no data 36 99
  Enterobacter sp. TBS_079 MPMX20_03302 HTH-type transcriptional regulator CynR insig. 37 97
  Pseudomonas simiae WCS417 PS417_19375 LysR family transcriptional regulator insig. 37 100
  Acidovorax sp. GW101-3H11 Ac3H11_2899 Probable LysR-family transcriptional regulator insig. 36 98
o Ralstonia solanacearum PSI07 RPSI07_RS12195 LysR family transcriptional regulator insig. 38 96
  Pseudomonas sp. RS175 PFR28_01830 HTH-type transcriptional regulator CynR insig. 37 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF17 LysR family transcriptional regulator YfeR insig. 38 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05100 LysR family transcriptional regulator insig. 38 96
o Ralstonia solanacearum UW163 UW163_RS08525 LysR family transcriptional regulator insig. 38 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03809 transcriptional regulator, LysR family insig. 33 99
  Variovorax sp. OAS795 ABID97_RS11710 LysR substrate-binding domain-containing protein no data 38 97
o Ralstonia solanacearum GMI1000 RS_RS12720 LysR family transcriptional regulator insig. 38 96
  Pseudomonas fluorescens FW300-N2E3 AO353_27930 LysR family transcriptional regulator strong 35 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family insig. 38 99
  Pseudomonas fluorescens SBW25 PFLU_RS21345 LysR family transcriptional regulator insig. 37 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21345 LysR family transcriptional regulator sig. 37 99
  Pseudomonas syringae pv. syringae B728a Psyr_3236 transcriptional regulator, LysR family strong 36 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3236 transcriptional regulator, LysR family insig. 36 98
  Paraburkholderia graminis OAS925 ABIE53_001823 DNA-binding transcriptional LysR family regulator insig. 38 99
  Variovorax sp. SCN45 GFF885 Transcriptional regulator, LysR family insig. 37 97
  Variovorax sp. SCN45 GFF6826 Transcriptional regulator, LysR family no data 37 98
  Azospirillum sp. SherDot2 MPMX19_02886 HTH-type transcriptional regulator CynR insig. 35 97
  Pantoea sp. MT58 IAI47_05470 LysR family transcriptional regulator insig. 36 96
  Pseudomonas fluorescens SBW25 PFLU_RS10590 LysR family transcriptional regulator insig. 34 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10590 LysR family transcriptional regulator sig. 34 98
  Cupriavidus basilensis FW507-4G11 RR42_RS31055 3-hydroxybutyryl-CoA dehydrogenase insig. 33 100
  Cupriavidus basilensis FW507-4G11 RR42_RS21140 LysR family transcriptional regulator insig. 38 100
  Burkholderia phytofirmans PsJN BPHYT_RS20345 LysR family transcriptional regulator insig. 32 99
  Escherichia coli ECRC101 OKFHMN_22230 yfeR Uncharacterized HTH-type transcriptional regulator YfeR insig. 35 99
  Escherichia coli ECRC101 MCAODC_12760 yfeR Uncharacterized HTH-type transcriptional regulator YfeR insig. 35 99
  Escherichia coli ECRC98 JDDGAC_26180 yfeR Uncharacterized HTH-type transcriptional regulator YfeR no data 35 99
  Escherichia coli ECRC99 KEDOAH_05990 yfeR Uncharacterized HTH-type transcriptional regulator YfeR no data 35 99
  Pseudomonas fluorescens FW300-N2C3 AO356_21655 LysR family transcriptional regulator insig. 35 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS31250 LysR family transcriptional regulator insig. 33 98
  Escherichia fergusonii Becca EFB2_01468 HTH-type transcriptional regulator CynR insig. 35 99
  Escherichia coli ECOR27 NOLOHH_13910 yfeR Uncharacterized HTH-type transcriptional regulator YfeR cofit 35 99
  Escherichia coli ECRC62 BNILDI_12775 yfeR Uncharacterized HTH-type transcriptional regulator YfeR insig. 35 99
  Escherichia coli BW25113 b2409 yfeR predicted DNA-binding transcriptional regulator (NCBI) sig. 35 99