| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas sp. S08-1 | OH686_06115 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Pseudomonas putida KT2440 | PP_2041 | | Transcriptional regulator, LysR family | sig. | 79 | 95 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01265 | | LysR family transcriptional regulator | cofit | 36 | 89 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS11270 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS15050 | | LysR substrate-binding domain-containing protein | insig. | 30 | 94 |
| o | Rhodopseudomonas palustris CGA009 | TX73_024395 | | LysR substrate-binding domain-containing protein | insig. | 34 | 89 |
| o | Variovorax sp. SCN45 | GFF1743 | | Transcriptional regulator, LysR family | insig. | 32 | 94 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS17420 | | transcriptional regulator LysR family | insig. | 29 | 97 |
| | Variovorax sp. SCN45 | GFF881 | | Transcriptional regulator ligR, LysR family | insig. | 31 | 90 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS12135 | | LysR substrate-binding domain-containing protein | insig. | 30 | 93 |
| o | Azospirillum sp. SherDot2 | MPMX19_06975 | | HTH-type transcriptional regulator HdfR | insig. | 30 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3634 | | Transcriptional regulator | insig. | 32 | 75 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS02790 | | LysR substrate-binding domain-containing protein | insig. | 29 | 89 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS09560 | | LysR substrate-binding domain-containing protein | insig. | 32 | 96 |
| o | Rhodospirillum rubrum S1H | Rru_A2004 | | Transcriptional Regulator, LysR family (NCBI) | cofit | 31 | 92 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5605 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 34 | 81 |
| | Azospirillum sp. SherDot2 | MPMX19_04990 | | Hydrogen peroxide-inducible genes activator | insig. | 29 | 93 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5605 | | LysR family regulatory protein | no data | 29 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23070 | | LysR family transcriptional regulator | insig. | 31 | 75 |
| | Variovorax sp. SCN45 | GFF6543 | | Transcriptional regulator, LysR family | insig. | 31 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2141 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 29 | 93 |
| | Rhodospirillum rubrum S1H | Rru_A0330 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 31 | 89 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS12440 | | LysR substrate-binding domain-containing protein | insig. | 28 | 93 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2180 | | transcriptional regulator, LysR family | sig. | 28 | 94 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2180 | | transcriptional regulator, LysR family | insig. | 28 | 94 |
| o | Dickeya dianthicola 67-19 | HGI48_RS18660 | | nitrogen assimilation transcriptional regulator NAC | insig. | 28 | 92 |
| | Rahnella sp. WP5 | EX31_RS17470 | | nitrogen assimilation transcriptional regulator | insig. | 33 | 74 |
| | Variovorax sp. SCN45 | GFF3056 | | Nitrogen assimilation regulatory protein Nac | insig. | 31 | 90 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS10800 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01365 | | transcriptional regulator, LysR family | insig. | 31 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19515 | | LysR family transcriptional regulator | insig. | 31 | 85 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5194 | | Nitrogen assimilation regulatory protein Nac | insig. | 31 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01144 | | transcriptional regulator, LysR family | insig. | 31 | 87 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS16320 | | transcriptional regulator | insig. | 30 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3796 | | Transcriptional regulator ligR, LysR family | sig. | 29 | 91 |
| o | Dickeya dianthicola ME23 | DZA65_RS19795 | | nitrogen assimilation transcriptional regulator | insig. | 28 | 92 |
| o | Ralstonia solanacearum GMI1000 | RS_RS21630 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_1431 | | transcriptional regulator, LysR family (RefSeq) | insig. | 30 | 95 |
| | Rahnella sp. WP5 | EX31_RS15525 | | nitrogen assimilation transcriptional regulator | insig. | 27 | 92 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | insig. | 30 | 94 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | sig. | 30 | 94 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS02820 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01134 | | transcriptional regulator, LysR family | no data | 28 | 89 |
| o | Dickeya dadantii 3937 | DDA3937_RS08235 | | nitrogen assimilation transcriptional regulator NAC | sig. | 28 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10850 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3858 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 29 | 93 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08130 | | LysR family transcriptional regulator | insig. | 29 | 77 |
| o | Variovorax sp. OAS795 | ABID97_RS27365 | | nitrogen assimilation transcriptional regulator NAC | insig. | 30 | 90 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004014 | | LysR family nitrogen assimilation transcriptional regulator | insig. | 29 | 85 |
| o | Agrobacterium fabrum C58 | Atu4279 | | LysR family transcriptional regulator | insig. | 26 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30475 | | LysR family transcriptional regulator | insig. | 30 | 74 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF785 | | Transcriptional regulator ligR, LysR family | insig. | 25 | 94 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00849 | | HTH-type transcriptional regulator GltC | insig. | 26 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS11435 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39395 | | LysR family transcriptional regulator | insig. | 29 | 74 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39320 | | LysR substrate-binding domain-containing protein | insig. | 33 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS18700 | | LysR substrate-binding domain-containing protein | insig. | 28 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_005837 | | LysR family nitrogen assimilation transcriptional regulator | insig. | 29 | 89 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS02165 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_001823 | | DNA-binding transcriptional LysR family regulator | insig. | 28 | 89 |
| | Shewanella amazonensis SB2B | Sama_2215 | | LysR family transcriptional regulator (RefSeq) | strong | 29 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23130 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| o | Bosea sp. OAE506 | ABIE41_RS10610 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05098 | | DNA-binding transcriptional regulator, LysR family | insig. | 28 | 89 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1181 | | Transcriptional regulator ligR, LysR family | insig. | 28 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39445 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF17 | | LysR family transcriptional regulator YfeR | insig. | 32 | 89 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4595 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 29 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08035 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13310 | lysR | LysR family transcriptional regulator | insig. | 28 | 89 |
| | Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 33 | 73 |
| o | Pantoea sp. MT58 | IAI47_07570 | | nitrogen assimilation transcriptional regulator NAC | sig. | 27 | 74 |
| | Enterobacter sp. TBS_079 | MPMX20_02983 | | HTH-type transcriptional regulator ArgP | strong | 28 | 74 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0565 | | Transcriptional regulator | insig. | 28 | 74 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1045 | | Transcriptional regulator | strong | 27 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | strong | 27 | 94 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4424 | | Transcriptional regulator | no data | 27 | 94 |
| | Variovorax sp. SCN45 | GFF3832 | | Transcriptional regulator KPN_02830, LysR family | no data | 27 | 89 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3715 | | transcriptional regulator, LysR family (RefSeq) | insig. | 27 | 90 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05567 | | LysR substrate binding domain protein | insig. | 27 | 83 |
| o | Klebsiella michiganensis M5al | BWI76_RS08260 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2347 | | Hydrogen peroxide-inducible genes activator | strong | 27 | 94 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 31 | 83 |
| | Variovorax sp. SCN45 | GFF6064 | | Transcriptional regulator YfeR, LysR family | no data | 31 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03425 | | LysR family transcriptional regulator | insig. | 29 | 73 |
| o | Serratia liquefaciens MT49 | IAI46_16755 | | nitrogen assimilation transcriptional regulator NAC | insig. | 27 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23395 | | LysR family transcriptional regulator | insig. | 34 | 52 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39470 | | LysR family transcriptional regulator | insig. | 30 | 74 |
| | Azospirillum sp. SherDot2 | MPMX19_03557 | | HTH-type transcriptional regulator CynR | insig. | 29 | 82 |
| | Escherichia coli ECOR27 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 94 |
| | Serratia liquefaciens MT49 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | insig. | 28 | 85 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2236 | | Transcriptional regulator | insig. | 27 | 92 |
| | Klebsiella michiganensis M5al | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | strong | 27 | 94 |
| | Escherichia fergusonii Becca | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 94 |
| | Escherichia coli ECOR38 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 94 |
| | Escherichia coli ECRC101 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 94 |
| | Escherichia coli ECRC102 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 94 |
| | Escherichia coli ECRC62 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | cofit | 28 | 94 |
| | Escherichia coli ECRC98 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 94 |
| | Escherichia coli ECRC99 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | no data | 28 | 94 |