| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Alteromonas macleodii MIT1002 | MIT1002_02436 | | putative transposase OrfB | insig. | 100 | 100 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_07550 | | IS3 family transposase | insig. | 53 | 99 |
| | Mycobacterium tuberculosis H37Rv | Rv3430c | | Possible transposase | insig. | 40 | 87 |
| | Pseudomonas sp. DMC3 | GFF3741 | | IS3 family transposase ISAfe5 | cofit | 57 | 35 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_00200 | | IS3 family transposase | no data | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_08295 | | IS3 family transposase | no data | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_16410 | | IS3 family transposase | no data | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_08325 | | IS3 family transposase | no data | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_11980 | | IS3 family transposase | no data | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_15755 | | IS3 family transposase | no data | 33 | 46 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16875 | | integrase | insig. | 35 | 56 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0105 | | Integrase, catalytic region | no data | 34 | 46 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3810 | | Integrase, catalytic region | no data | 34 | 46 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0105 | | Integrase, catalytic region | no data | 34 | 46 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3810 | | Integrase, catalytic region | no data | 34 | 46 |
| | Pseudomonas orientalis W4I3 | QF045_RS05820 | | IS3 family transposase | no data | 34 | 46 |
| | Pseudomonas orientalis W4I3 | QF045_RS07035 | | IS3 family transposase | no data | 34 | 46 |
| | Pseudomonas orientalis W4I3 | QF045_RS19055 | | IS3 family transposase | no data | 34 | 46 |
| | Azospirillum sp. SherDot2 | MPMX19_03185 | | IS3 family transposase ISMdi5 | insig. | 29 | 79 |
| | Caulobacter crescentus NA1000 | CCNA_00660 | | transposase | no data | 28 | 83 |
| | Caulobacter crescentus NA1000 | CCNA_02739 | | transposase | no data | 28 | 83 |
| o | Caulobacter crescentus NA1000 | CCNA_02814 | | transposase | no data | 28 | 83 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00660 | | transposase | no data | 28 | 83 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02739 | | transposase | no data | 28 | 83 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_02814 | | transposase | no data | 28 | 83 |
| | Marinobacter adhaerens HP15 | HP15_p187g105 | | integrase, catalytic region | insig. | 34 | 56 |
| | Enterobacter sp. TBS_079 | MPMX20_03504 | | IS3 family transposase ISEhe3 | no data | 31 | 48 |
| | Enterobacter sp. TBS_079 | MPMX20_03507 | | IS3 family transposase ISEhe3 | no data | 31 | 48 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3226.1 | | Mobile element protein | no data | 25 | 80 |
| | Shewanella amazonensis SB2B | Sama_1878 | | IS3 family transposase (RefSeq) | insig. | 34 | 53 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00854 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01077 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01764 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01834 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02527 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03303 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03388 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03524 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03763 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04299 | | IS3 family transposase ISEhe3 | no data | 30 | 48 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4883 | | Mobile element protein | insig. | 32 | 56 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_829 | | Mobile element protein | insig. | 31 | 47 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_25795 | | IS3 family transposase | no data | 30 | 48 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08835 | | IS3 family transposase | no data | 33 | 45 |
| | Dickeya dianthicola 67-19 | HGI48_RS04140 | | IS3 family transposase | no data | 32 | 48 |
| | Agrobacterium fabrum C58 | Atu5370 | | transposase | no data | 34 | 47 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c28510 | | putative transposase | insig. | 32 | 48 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS09410 | | IS3 family transposase | insig. | 28 | 52 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07175 | | IS3 family transposase | no data | 33 | 45 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07690 | | IS3 family transposase | no data | 33 | 45 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12275 | | IS3 family transposase | no data | 33 | 45 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12300 | | IS3 family transposase | no data | 33 | 45 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12560 | | IS3 family transposase | no data | 33 | 45 |
| | Pseudomonas putida KT2440 | PP_4420 | | transposase | insig. | 32 | 48 |
| o | Sphingobium sp. HT1-2 | GFF4329 | | Mobile element protein | cofit | 26 | 88 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_01970 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_03080 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_03585 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_04825 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05375 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_07150 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_07715 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_12425 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_22805 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_23425 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_24065 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_24680 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_25035 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_26945 | tnp-IS3 | IS3 family transposase | no data | 29 | 53 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_01455 | | transposase | no data | 26 | 79 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_11580 | | transposase | no data | 26 | 79 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15040 | | transposase | no data | 26 | 79 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.848.1 | | Mobile element protein | no data | 25 | 80 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.868.1 | | Mobile element protein | no data | 25 | 80 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4867.1 | | Mobile element protein | no data | 25 | 80 |
| | Pseudomonas stutzeri RCH2 | Psest_3411 | | Transposase and inactivated derivatives | no data | 30 | 47 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1535.1 | | Mobile element protein | no data | 25 | 80 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4725.1 | | Mobile element protein | no data | 25 | 80 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5270.1 | | Mobile element protein | no data | 25 | 80 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0652 | | Integrase, catalytic region | no data | 33 | 47 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0988 | | Integrase, catalytic region | no data | 33 | 47 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4608 | | Integrase, catalytic region | no data | 33 | 47 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0652 | | Integrase, catalytic region | no data | 33 | 47 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0988 | | Integrase, catalytic region | no data | 33 | 47 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4608 | | Integrase, catalytic region | no data | 33 | 47 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0358 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0918 | | integrase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1892 | | integrase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2399 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2427 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2674 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3634 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4578 | | transposase (NCBI ptt file) | no data | 26 | 84 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_08095 | | transposase | no data | 30 | 47 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09735 | | transposase | no data | 30 | 47 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_13750 | | transposase | no data | 30 | 47 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22640 | | transposase | no data | 30 | 47 |
| | Pseudomonas stutzeri RCH2 | Psest_0426 | | Transposase and inactivated derivatives | insig. | 29 | 48 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01200 | | hypothetical protein | no data | 31 | 57 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01770 | | hypothetical protein | no data | 31 | 57 |