Homologs of GFF3924 from Xanthobacter sp. DMC5

Ribosome hibernation promotion factor
SEED: Ribosomal subunit interface protein

59 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3924 Ribosome hibernation promotion factor insig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_000265 ribosome-associated translation inhibitor RaiA cofit 53 97
o Sinorhizobium meliloti 1021 SMc01140 SIGMA54 modulation protein no data 48 96
o Bosea sp. OAE506 ABIE41_RS00120 ribosome-associated translation inhibitor RaiA insig. 55 97
o Agrobacterium fabrum C58 Atu0331 sigma-54 modulation protein strong 49 96
o Rhizobium sp. OAE497 ABIE40_RS01865 ribosome-associated translation inhibitor RaiA sig. 46 98
o Caulobacter crescentus NA1000 CCNA_03711 ribosome-associated factor Y strong 44 97
o Caulobacter crescentus NA1000 Δfur CCNA_03711 ribosome-associated factor Y cofit 44 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16080 ribosome-associated translation inhibitor RaiA insig. 43 97
o Dinoroseobacter shibae DFL-12 Dshi_3583 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) sig. 40 96
o Phaeobacter inhibens DSM 17395 PGA1_c35970 putative sigma(54) modulation protein sig. 40 97
o Azospirillum sp. SherDot2 MPMX19_02669 Ribosome hibernation promotion factor no data 42 98
o Azospirillum brasilense Sp245 AZOBR_RS18875 ribose ABC transporter permease strong 37 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2191 ribosomal subunit interface protein strong 36 97
o Sphingobium sp. HT1-2 GFF4166 Ribosome hibernation promoting factor Hpf cofit 34 97
  Synechocystis sp000284455 PCC 6803 SGL_RS12505 ribosome-associated translation inhibitor RaiA cofit 26 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU1629 yfiA ribosomal subunit interface protein (TIGR) strong 26 97
  Synechococcus elongatus PCC 7942 Synpcc7942_2352 lrtA sigma 54 modulation protein / SSU ribosomal protein S30P insig. 26 98
  Fusobacterium nucleatum SB010 HUW76_07850 ribosome-associated translation inhibitor RaiA strong 24 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0426 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) insig. 25 97
  Escherichia coli BL21 ECD_03068 ribosome hibernation promoting factor HPF; stabilizes 100S dimers sig. 29 49
  Escherichia fergusonii Becca EFB2_00620 Ribosome hibernation promoting factor insig. 29 49
  Escherichia coli ECOR27 NOLOHH_09735 Ribosome hibernation promoting factor insig. 29 49
  Escherichia coli ECOR38 HEPCGN_16810 Ribosome hibernation promoting factor cofit 29 49
  Escherichia coli ECRC100 OKFHMN_17935 Ribosome hibernation promoting factor insig. 29 49
  Escherichia coli ECRC101 MCAODC_08455 Ribosome hibernation promoting factor insig. 29 49
  Escherichia coli ECRC102 NIAGMN_15695 Ribosome hibernation promoting factor insig. 29 49
  Escherichia coli ECRC62 BNILDI_01800 Ribosome hibernation promoting factor strong 29 49
  Escherichia coli ECRC98 JDDGAC_21560 Ribosome hibernation promoting factor cofit 29 49
  Escherichia coli ECRC99 KEDOAH_10215 Ribosome hibernation promoting factor no data 29 49
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00497 Ribosome hibernation promoting factor sig. 29 49
  Escherichia coli Nissle 1917 ECOLIN_RS18430 ribosome hibernation promoting factor insig. 29 49
  Escherichia coli BW25113 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) sig. 29 49
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2947 Ribosome hibernation protein YhbH cofit 29 49
  Variovorax sp. SCN45 GFF7293 Ribosome hibernation promoting factor Hpf cofit 31 51
  Kangiella aquimarina DSM 16071 B158DRAFT_2079 ribosomal subunit interface protein insig. 26 48
  Variovorax sp. OAS795 ABID97_RS04490 ribosome-associated translation inhibitor RaiA insig. 31 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS01750 ribosome-associated translation inhibitor RaiA insig. 29 64
  Enterobacter asburiae PDN3 EX28DRAFT_3257 ribosomal subunit interface protein cofit 27 49
  Acidovorax sp. GW101-3H11 Ac3H11_681 Ribosome hibernation protein YhbH sig. 31 51
  Rahnella sp. WP5 EX31_RS12395 ribosome hibernation promoting factor cofit 28 49
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13735 hpf ribosome hibernation promoting factor insig. 26 49
  Enterobacter sp. TBS_079 MPMX20_04109 Ribosome hibernation promoting factor sig. 28 49
  Pseudomonas segetis P6 ACVTMO_RS19125 hpf ribosome hibernation-promoting factor, HPF/YfiA family strong 29 50
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P insig. 27 63
  Paraburkholderia graminis OAS925 ABIE53_000717 putative sigma-54 modulation protein strong 27 63
  Pseudomonas stutzeri RCH2 Psest_3314 ribosomal subunit interface protein sig. 29 52
  Burkholderia phytofirmans PsJN BPHYT_RS02900 ribosome hibernation promoting factor sig. 28 63
  Klebsiella pneumoniae MKP103 KDGMDA_06085 ribosome hibernation promoting factor insig. 25 49
  Klebsiella pneumoniae MRSN742743 KFA93_RS13340 hpf;go_process=primary ribosome hibernation promoting factor sig. 25 49
  Rhodanobacter sp. FW510-T8 OKGIIK_02260 raiA ribosomal subunit interface protein strong 30 51
  Alteromonas macleodii MIT1002 MIT1002_00826 Ribosome hibernation promoting factor strong 25 49
  Klebsiella michiganensis M5al BWI76_RS25270 ribosome hibernation promoting factor sig. 25 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2612 Ribosome hibernation protein YhbH strong 31 53
  Pseudomonas sp. S08-1 OH686_08550 Ribosome hibernation promoting factor Hpf cofit 28 48
  Pseudomonas aeruginosa MRSN321 DY961_RS24160 raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome-associated translation inhibitor RaiA strong 27 51
  Pseudomonas aeruginosa PA14 IKLFDK_01765 Sigma 54 modulation protein / S30EA ribosomal protein strong 27 51
  Pseudomonas aeruginosa PUPa3 DQ20_RS56620 raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome-associated translation inhibitor RaiA strong 27 51
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15710 ribosome-associated translation inhibitor RaiA insig. 28 51