Homologs of GFF3635 from Xanthobacter sp. DMC5

Type IV secretion system protein virB4
SEED: Conjugative transfer protein TrbE
KEGG: type IV secretion system protein VirB4

76 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3635 Type IV secretion system protein virB4 insig. 100 100
  Xanthobacter sp. DMC5 GFF2638 Type IV secretion system protein virB4 insig. 95 100
o Rhodopseudomonas palustris CGA009 TX73_021355 conjugal transfer protein TrbE insig. 79 100
  Rhodopseudomonas palustris CGA009 TX73_011510 conjugal transfer protein TrbE cofit 76 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2569 Type IV secretory pathway, VirB4 components insig. 74 99
o Shewanella sp. ANA-3 Shewana3_1285 conjugal transfer ATPase TrbE (RefSeq) cofit 62 99
o Dickeya dianthicola 67-19 HGI48_RS03910 conjugal transfer protein TrbE insig. 62 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4438 Conjugative transfer protein TrbE insig. 61 100
o Ralstonia solanacearum GMI1000 RS_RS12940 conjugal transfer protein TrbE insig. 62 99
o Variovorax sp. SCN45 GFF6576 Conjugative transfer protein TrbE insig. 62 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3450 Conjugative transfer protein TrbE insig. 63 99
o Castellaniella sp019104865 MT123 ABCV34_RS00170 conjugal transfer protein TrbE insig. 62 99
  Variovorax sp. SCN45 GFF4846 Conjugative transfer protein TrbE insig. 62 99
o Pseudomonas aeruginosa PA14 IKLFDK_12840 Conjugal transfer protein TrbE no data 63 100
  Variovorax sp. SCN45 GFF4417 Conjugative transfer protein TrbE insig. 61 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4179 Conjugative transfer protein TrbE insig. 62 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3075 Type IV secretory pathway, VirB4 components insig. 60 99
o Dickeya dadantii 3937 DDA3937_RS04010 conjugal transfer protein TrbE insig. 61 99
o Sphingobium sp. HT1-2 GFF191 Conjugative transfer protein TrbE cofit 61 99
  Dickeya dianthicola 67-19 HGI48_RS08435 conjugal transfer protein TrbE insig. 61 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0386 Type IV secretory pathway, VirB4 components insig. 61 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2915 Type IV secretory pathway, VirB4 components insig. 60 99
o Agrobacterium fabrum C58 Atu6038 conjugal transfer protein insig. 38 99
o Marinobacter adhaerens HP15 HP15_p42g49 type IV secretion/conjugal transfer ATPase, VirB4 family cofit 38 98
  Rhodospirillum rubrum S1H Rru_A0805 conjugal transfer protein (NCBI) insig. 73 31
  Dechlorosoma suillum PS Dsui_2577 type IV secretory pathway, VirB4 component cofit 27 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS43740 type IV secretion system protein VirB4 insig. 27 97
  Agrobacterium fabrum C58 Atu5165 type IV secretion protein AvhB4 sig. 26 92
  Sinorhizobium meliloti 1021 SMa1315 VirB4 type IV secretion protein insig. 26 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01895 VirB4 family type IV secretion/conjugal transfer ATPase insig. 27 94
  Caulobacter crescentus NA1000 CCNA_02501 type IV secretory pathway, VirB4 ATPase cofit 29 71
  Caulobacter crescentus NA1000 Δfur CCNA_02501 type IV secretory pathway, VirB4 ATPase cofit 29 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06158 type IV secretion system protein VirB4 insig. 25 71
  Phaeobacter inhibens DSM 17395 PGA1_c22850 type IV secretion system protein VirB insig. 30 45
  Dinoroseobacter shibae DFL-12 Dshi_3641 CagE TrbE VirB component of type IV transporter system (RefSeq) insig. 31 45
  Dinoroseobacter shibae DFL-12 Dshi_3976 CagE TrbE VirB component of type IV transporter system (RefSeq) insig. 31 45
  Castellaniella sp019104865 MT123 ABCV34_RS03365 VirB4 family type IV secretion/conjugal transfer ATPase insig. 24 96
  Escherichia coli ECOR27 NOLOHH_00340 ATPase insig. 23 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11435 VirB4 family type IV secretion/conjugal transfer ATPase insig. 21 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS06710 VirB4 family type IV secretion/conjugal transfer ATPase insig. 25 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2054.1 hypothetical protein insig. 23 67
  Escherichia coli ECOR38 HEPCGN_00295 ATPase insig. 20 85
  Burkholderia phytofirmans PsJN BPHYT_RS32185 type IV secretion protein VirB4 insig. 27 59
  Dickeya dianthicola ME23 DZA65_RS14385 ATPase insig. 22 86
  Burkholderia phytofirmans PsJN BPHYT_RS00780 type IV secretion protein VirB4 insig. 24 86
  Agrobacterium fabrum C58 Atu6170 component of type IV secretion system insig. 26 58
  Dickeya dianthicola 67-19 HGI48_RS07125 VirB3 family type IV secretion system protein insig. 23 86
  Dickeya dadantii 3937 DDA3937_RS13845 VirB3 family type IV secretion system protein insig. 22 86
  Escherichia coli ECOR27 NOLOHH_00250 conjugal transfer protein TraB cofit 27 41
  Acinetobacter radioresistens SK82 MPMX26_03191 Type IV secretion system protein virB4 cofit 23 58
  Dickeya dianthicola ME23 DZA65_RS07630 ATPase insig. 31 17
  Burkholderia phytofirmans PsJN BPHYT_RS36315 CagE TrbE VirB component of type IV transporter system insig. 23 51
  Acidovorax sp. GW101-3H11 Ac3H11_2809 IncF plasmid conjugative transfer pilus assembly protein TraC insig. 25 36
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3144 IncF plasmid conjugative transfer pilus assembly protein TraC insig. 25 38
  Bacteroides stercoris CC31F HMPREF1181_RS09710 TraG family conjugative transposon ATPase cofit 24 36
  Bacteroides thetaiotaomicron VPI-5482 BT4770 conserved protein found in conjugate transposon (NCBI ptt file) sig. 23 35
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3182 Bacteroides conjugation system ATPase, TraG family insig. 23 36
  Sphingobium sp. HT1-2 GFF4310 IncF plasmid conjugative transfer pilus assembly protein TraC insig. 22 52
  Bacteroides thetaiotaomicron VPI-5482 BT0093 conserved protein found in conjugate transposon (NCBI ptt file) insig. 22 36
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4363 Bacteroides conjugation system ATPase, TraG family insig. 23 36
  Bacteroides stercoris CC31F HMPREF1181_RS11500 TraG family conjugative transposon ATPase insig. 23 35
  Erwinia tracheiphila SCR3 LU632_RS25840 traC type IV secretion system protein TraC insig. 25 31
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09970 conjugal transfer protein TraG insig. 23 35
  Bacteroides thetaiotaomicron VPI-5482 BT2603 conserved protein found in conjugate transposon (NCBI ptt file) insig. 22 35
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS18820 type IV secretion system protein TraC insig. 21 59
  Rhodanobacter denitrificans MT42 LRK55_RS19260 type IV secretion system protein TraC insig. 23 39
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1947 Bacteroides conjugation system ATPase, TraG family sig. 22 35
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20990 conjugal transfer protein TraG insig. 22 35
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09885 TraG family conjugative transposon ATPase insig. 22 35
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09030 TraG family conjugative transposon ATPase sig. 21 35
  Phocaeicola dorei CL03T12C01 ABI39_RS08805 TraG family conjugative transposon ATPase insig. 21 35
  Bacteroides ovatus ATCC 8483 BACOVA_04779 conjugation system ATPase, TraG family insig. 27 16
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1362 Bacteroides conjugation system ATPase, TraG family insig. 22 35
  Bacteroides ovatus ATCC 8483 BACOVA_00467 conjugation system ATPase, TraG family insig. 25 18
  Bacteroides stercoris CC31F HMPREF1181_RS15770 DUF87 domain-containing protein insig. 24 20
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1167 IncF plasmid conjugative transfer pilus assembly protein TraC insig. 22 30