Homologs of GFF3226 from Sphingobium sp. HT1-2

Serine recombinase, PinQ/PinR-type
KEGG: putative DNA-invertase from lambdoid prophage Rac

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3226 Serine recombinase, PinQ/PinR-type cofit 100 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12085 recombinase family protein insig. 73 81
  Erwinia amylovora T8 OLJFJH_00050 resolvase no data 64 81
o Erwinia amylovora T8 OLJFJH_00195 resolvase no data 64 81
o Erwinia tracheiphila SCR3 LU632_RS07385 recombinase family protein insig. 65 81
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_24180 resolvase cofit 65 81
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20345 recombinase family protein cofit 63 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20565 recombinase family protein cofit 63 81
  Sphingobium sp. HT1-2 GFF1176 Serine recombinase, PinQ/PinR-type cofit 66 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02167 Tn3 family transposase ISYps3 cofit 58 82
o Escherichia coli BL21 ECD_01504 Qin prophage; putative site-specific recombinase no data 58 82
o Escherichia coli BW25113 b1374 pinR Rac prophage; predicted site-specific recombinase (NCBI) no data 58 82
  Escherichia coli BW25113 b1545 pinQ Qin prophage; predicted site-specific recombinase (NCBI) insig. 58 82
  Escherichia coli BL21 ECD_01345 Rac prophage; putative site-specific recombinase no data 58 82
o Escherichia coli ECOR27 NOLOHH_18610 pinR Serine recombinase PinR cofit 58 82
  Pseudomonas sp. SVBP6 COO64_RS22175 recombinase family protein insig. 62 81
o Ralstonia solanacearum PSI07 RPSI07_RS15555 recombinase family protein insig. 60 81
  Escherichia coli Nissle 1917 ECOLIN_RS26325 recombinase family protein insig. 49 78
  Escherichia coli ECRC100 OKFHMN_11730 spoIVCA resolvase insig. 50 78
  Escherichia coli ECRC101 MCAODC_02245 spoIVCA resolvase insig. 50 78
  Escherichia coli ECRC102 NIAGMN_09580 spoIVCA resolvase insig. 50 78
  Escherichia coli ECRC99 KEDOAH_16415 spoIVCA resolvase no data 50 78
  Methylophilus sp. DMC18 GFF745 Tn3 family transposase ISYps3 insig. 48 80
  Escherichia coli ECOR27 NOLOHH_15375 recombinase family protein insig. 48 81
  Ralstonia solanacearum UW163 UW163_RS01540 recombinase family protein insig. 47 78
  Escherichia coli ECOR38 HEPCGN_26960 Putative DNA-invertase insig. 65 52
o Pseudomonas orientalis W4I3 QF045_RS23030 recombinase family protein insig. 46 81
o Enterobacter sp. TBS_079 MPMX20_04027 Serine recombinase PinR insig. 47 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_18145 resolvase cofit 41 80
  Shewanella oneidensis MR-1 SOA0086 site-specific recombinase, resolvase family (NCBI ptt file) insig. 36 81
  Sinorhizobium meliloti 1021 SMc02287 DNA-invertase insig. 37 80
  Escherichia coli BW25113 b1158 pin e14 prophage; site-specific DNA recombinase (NCBI) sig. 39 66
  Kangiella aquimarina DSM 16071 B158DRAFT_0960 Site-specific recombinases, DNA invertase Pin homologs insig. 36 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1543 DNA-invertase insig. 38 67
  Azospirillum sp. SherDot2 MPMX19_01561 DNA-invertase hin insig. 36 79
  Escherichia coli ECRC101 MCAODC_00110 pinE site-specific DNA recombinase insig. 39 66
  Escherichia coli ECRC102 NIAGMN_07460 pinE site-specific DNA recombinase insig. 39 66
  Escherichia coli ECOR38 HEPCGN_04245 DNA-invertase insig. 36 79
  Methanococcus maripaludis S2 MMP_RS03990 recombinase family protein insig. 40 62
  Escherichia coli ECRC100 OKFHMN_09410 pinE site-specific DNA recombinase cofit 38 66
  Escherichia coli ECRC98 JDDGAC_13045 pinE site-specific DNA recombinase insig. 38 66
  Dinoroseobacter shibae DFL-12 Dshi_4084 Resolvase domain (RefSeq) insig. 35 79
  Azospirillum sp. SherDot2 MPMX19_06437 DNA-invertase hin insig. 43 65
  Dinoroseobacter shibae DFL-12 Dshi_3683 Resolvase domain (RefSeq) insig. 39 66
  Escherichia fergusonii Becca EFB2_03222 DNA-invertase hin insig. 39 67
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19155 DNA-invertase no data 35 79
  Sphingobium sp. HT1-2 GFF5199 hypothetical protein cofit 35 79
  Azospirillum sp. SherDot2 MPMX19_01313 DNA-invertase hin insig. 35 79
  Escherichia coli ECOR38 HEPCGN_26710 spoIVCA DNA-invertase insig. 38 67
  Escherichia coli ECRC98 JDDGAC_09160 spoIVCA DNA-invertase strong 39 66
  Escherichia coli ECRC101 MCAODC_20820 spoIVCA DNA-invertase insig. 37 67
  Klebsiella michiganensis M5al BWI76_RS12375 DNA-invertase hin sig. 38 65
  Sphingobium sp. HT1-2 GFF4499 hypothetical protein cofit 35 79
  Escherichia coli ECOR38 HEPCGN_24370 DNA invertase insig. 36 79
  Magnetospirillum magneticum AMB-1 AMB_RS16710 recombinase family protein insig. 37 74
  Dechlorosoma suillum PS Dsui_2500 site-specific recombinase, DNA invertase Pin cofit 36 79
  Shewanella loihica PV-4 Shew_0991 resolvase domain-containing protein (RefSeq) no data 38 66
  Shewanella loihica PV-4 Shew_3862 resolvase domain-containing protein (RefSeq) insig. 39 80
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04373 Transposon Tn3 resolvase insig. 31 80
  Klebsiella pneumoniae MKP103 KDGMDA_00030 Transposon Tn1331 resolvase no data 31 80
  Klebsiella pneumoniae MKP103 KDGMDA_02085 Transposon Tn1331 resolvase no data 31 80
  Pseudomonas stutzeri RCH2 Psest_4043 Site-specific recombinases, DNA invertase Pin homologs insig. 40 66
  Pseudomonas syringae pv. syringae B728a Psyr_2668 Helix-turn-helix, Fis-type insig. 37 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2668 Helix-turn-helix, Fis-type insig. 37 79
  Pseudomonas putida KT2440 PP_5490 site-specific DNA recombinase insig. 34 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3230.1 Phage DNA invertase insig. 35 77
  Synechocystis sp000284455 PCC 6803 SGL_RS01270 recombinase family protein insig. 32 78
  Agrobacterium fabrum C58 Atu6046 DNA invertase insig. 37 64
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20365 recombinase family protein cofit 36 65
  Dinoroseobacter shibae DFL-12 Dshi_4026 Resolvase domain (RefSeq) insig. 39 65
  Azospirillum brasilense Sp245 AZOBR_RS30300 resolvase insig. 38 68
  Magnetospirillum magneticum AMB-1 AMB_RS15985 recombinase family protein cofit 36 67
  Dinoroseobacter shibae DFL-12 Dshi_4105 Resolvase domain (RefSeq) insig. 38 65
  Erwinia tracheiphila SCR3 LU632_RS04400 recombinase family protein insig. 35 79
  Dickeya dianthicola 67-19 HGI48_RS12185 recombinase family protein insig. 39 78
  Methanococcus maripaludis JJ MMJJ_RS02615 recombinase family protein no data 35 62
  Dinoroseobacter shibae DFL-12 Dshi_3853 Resolvase domain (RefSeq) insig. 39 62
  Sphingobium sp. HT1-2 GFF5292 Phage DNA invertase cofit 33 78
  Shewanella sp. ANA-3 Shewana3_2637 resolvase domain-containing protein (RefSeq) insig. 33 80
  Variovorax sp. SCN45 GFF7081 Mobile element protein no data 37 65
  Escherichia coli ECRC62 BNILDI_21055 DNA-invertase cofit 35 76
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25760 Recombinase family protein cofit 36 65
  Erwinia tracheiphila SCR3 LU632_RS10670 recombinase family protein sig. 36 65
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12400 DUF1492 domain-containing protein insig. 38 62
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15975 master DNA invertase Mpi family serine-type recombinase insig. 32 78
  Cupriavidus basilensis FW507-4G11 RR42_RS00040 recombinase insig. 37 83
  Dinoroseobacter shibae DFL-12 Dshi_3680 Resolvase domain (RefSeq) no data 35 80
  Dinoroseobacter shibae DFL-12 Dshi_3876 Resolvase domain (RefSeq) no data 35 80
  Dinoroseobacter shibae DFL-12 Dshi_4081 Resolvase domain (RefSeq) no data 35 80
o Paraburkholderia sabiae LMG 24235 QEN71_RS33400 helix-turn-helix domain-containing protein no data 29 82
  Dechlorosoma suillum PS Dsui_0771 site-specific recombinase, DNA invertase Pin insig. 34 79
  Shewanella oneidensis MR-1 SOA0019 ISSod9, DNA-invertase (NCBI ptt file) no data 36 65
  Shewanella oneidensis MR-1 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) no data 36 65
  Rhodospirillum rubrum S1H Rru_B0010 Resolvase (NCBI) insig. 36 65
  Sphingobium sp. HT1-2 GFF5326 Phage integrase, site-specific serine recombinase cofit 38 65
  Erwinia tracheiphila SCR3 LU632_RS25210 recombinase family protein insig. 37 66
  Dickeya dianthicola ME23 DZA65_RS12635 recombinase family protein insig. 39 78
  Erwinia tracheiphila SCR3 LU632_RS10615 recombinase family protein insig. 34 79
  Phocaeicola dorei CL03T12C01 ABI39_RS05885 master DNA invertase Mpi family serine-type recombinase insig. 35 78
  Klebsiella pneumoniae MKP103 KDGMDA_19850 DNA-invertase sig. 42 46