Homologs of Psest_2150 from Pseudomonas stutzeri RCH2

DNA polymerase LigD, polymerase domain
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

66 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_2150 DNA polymerase LigD, polymerase domain insig. 100 100
  Pseudomonas fluorescens FW300-N2C3 AO356_27730 ATP-dependent DNA ligase insig. 55 98
  Ralstonia solanacearum PSI07 RPSI07_RS21105 DNA ligase D insig. 57 96
  Pseudomonas sp. S08-1 OH686_01425 DNA ligase D cofit 56 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_797 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 55 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00864 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 54 97
  Pseudomonas syringae pv. syringae B728a Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 53 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 53 95
  Pseudomonas simiae WCS417 PS417_13125 ATP-dependent DNA ligase insig. 54 94
  Paraburkholderia graminis OAS925 ABIE53_002080 bifunctional non-homologous end joining protein LigD insig. 55 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03237 Multifunctional non-homologous end joining protein LigD cofit 54 98
  Burkholderia phytofirmans PsJN BPHYT_RS09215 ATP-dependent DNA ligase insig. 54 98
  Pseudomonas orientalis W4I3 QF045_RS16850 DNA ligase D insig. 52 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS08115 DNA ligase D insig. 55 96
  Pseudomonas aeruginosa MRSN321 DY961_RS16935 ligD;go_process=double-strand DNA ligase D insig. 56 96
  Pseudomonas aeruginosa PA14 IKLFDK_10445 DNA ligase D strong 56 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS39205 ligD;go_process=double-strand DNA ligase D insig. 56 96
  Pseudomonas fluorescens SBW25 PFLU_RS14185 DNA ligase D insig. 53 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14185 DNA ligase D insig. 53 98
  Pseudomonas sp. RS175 PFR28_01701 Multifunctional non-homologous end joining protein LigD insig. 53 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS22145 DNA ligase D insig. 54 93
  Pseudomonas stutzeri RCH2 Psest_2179 DNA ligase D insig. 53 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 49 93
  Paraburkholderia graminis OAS925 ABIE53_000212 bifunctional non-homologous end joining protein LigD insig. 51 94
  Pseudomonas sp. DMC3 GFF1659 Multifunctional non-homologous end joining protein LigD cofit 49 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06196 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 49 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1216 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 50 93
  Pseudomonas sp. RS175 PFR28_02106 Multifunctional non-homologous end joining protein LigD insig. 49 93
  Pseudomonas fluorescens FW300-N2C3 AO356_26950 ATP-dependent DNA ligase insig. 49 93
  Pseudomonas sp. SVBP6 COO64_RS24640 ligD DNA ligase D insig. 51 93
  Pseudomonas putida KT2440 PP_3260 DNA ligase D insig. 46 99
  Pseudomonas sp. BP01 JOY50_RS26485 ligD DNA ligase D insig. 47 99
  Cupriavidus basilensis FW507-4G11 RR42_RS37085 ATP-dependent DNA ligase insig. 50 94
  Variovorax sp. SCN45 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 49 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 46 92
  Herbaspirillum seropedicae SmR1 HSERO_RS11360 DNA ligase insig. 42 95
o Rhodanobacter sp. FW510-T8 OKGIIK_01670 DNA polymerase domain-containing protein insig. 40 92
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09920 non-homologous end-joining DNA ligase insig. 39 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.140.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 38 92
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02935 DNA ligase D insig. 38 95
  Lysobacter sp. OAE881 ABIE51_RS12790 non-homologous end-joining DNA ligase insig. 38 92
  Sinorhizobium meliloti 1021 SMc03959 hypothetical protein insig. 36 98
  Lysobacter sp. OAE881 ABIE51_RS12760 DNA ligase D insig. 39 91
  Bosea sp. OAE506 ABIE41_RS04575 DNA ligase D insig. 40 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10580 DNA ligase D insig. 37 96
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 37 95
  Xanthobacter sp. DMC5 GFF242 Multifunctional non-homologous end joining protein LigD insig. 37 88
  Rhodopseudomonas palustris CGA009 TX73_018915 DNA ligase D insig. 39 81
  Sphingobium sp. HT1-2 GFF5134 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD cofit 38 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3858 DNA ligase D insig. 38 84
  Rhizobium sp. OAE497 ABIE40_RS29525 DNA ligase D insig. 36 97
  Rhizobium sp. OAE497 ABIE40_RS26435 DNA ligase D insig. 35 90
  Agrobacterium fabrum C58 Atu5055 ATP-dependent DNA ligase insig. 37 97
  Bosea sp. OAE506 ABIE41_RS06605 DNA ligase D insig. 39 82
  Rhizobium sp. OAE497 ABIE40_RS28460 DNA ligase D insig. 39 81
  Sinorhizobium meliloti 1021 SM_b20685 hypothetical protein insig. 35 90
  Agrobacterium fabrum C58 Atu4632 ATP-dependent DNA ligase insig. 34 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20470 DNA ligase D insig. 28 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15285 DNA ligase D insig. 29 82
  Sinorhizobium meliloti 1021 SM_b21044 ATP-dependent DNA ligase insig. 31 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06915 DNA ligase D insig. 27 80
  Mycobacterium tuberculosis H37Rv Rv3730c Conserved hypothetical protein insig. 30 93
  Mycobacterium tuberculosis H37Rv Rv0269c Conserved hypothetical protein insig. 29 92
  Sinorhizobium meliloti 1021 SMa0417 hypothetical protein insig. 38 51
  Mycobacterium tuberculosis H37Rv Rv0938 ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) insig. 26 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS19200 hypothetical protein insig. 39 29