Homologs of Echvi_0837 from Echinicola vietnamensis KMM 6221, DSM 17526

RNA polymerase sigma factor, sigma-70 family

156 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0837 RNA polymerase sigma factor, sigma-70 family insig. 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2176 RNA polymerase sigma factor, sigma-70 family insig. 38 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3782 RNA polymerase sigma factor, sigma-70 family insig. 37 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2655 RNA polymerase sigma factor, sigma-70 family insig. 38 79
  Cellulophaga baltica 18 M666_RS17335 sigma-70 family RNA polymerase sigma factor insig. 34 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2161 RNA polymerase sigma factor, sigma-70 family insig. 31 80
  Bacteroides ovatus ATCC 8483 BACOVA_00784 Sigma-70 region 2 insig. 32 79
  Phocaeicola dorei CL03T12C01 ABI39_RS14645 sigma-70 family RNA polymerase sigma factor strong 34 79
  Bacteroides ovatus ATCC 8483 BACOVA_04457 RNA polymerase sigma factor, sigma-70 family insig. 32 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18335 sigma-70 family RNA polymerase sigma factor strong 34 79
  Bacteroides thetaiotaomicron VPI-5482 BT3517 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 34 81
  Bacteroides thetaiotaomicron VPI-5482 BT4636 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 84
  Bacteroides thetaiotaomicron VPI-5482 BT1728 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 83
  Bacteroides thetaiotaomicron VPI-5482 BT0978 ECF-type sigma factor (NCBI ptt file) sig. 33 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 29 89
  Phocaeicola dorei CL03T12C01 ABI39_RS21180 sigma-70 family RNA polymerase sigma factor insig. 30 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03970 hypothetical protein insig. 33 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11885 sigma-70 family RNA polymerase sigma factor strong 33 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09115 hypothetical protein strong 33 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3996 RNA polymerase sigma factor, sigma-70 family insig. 35 89
  Bacteroides ovatus ATCC 8483 BACOVA_03337 RNA polymerase sigma factor, sigma-70 family insig. 30 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11845 hypothetical protein insig. 34 79
  Bacteroides ovatus ATCC 8483 BACOVA_01604 Sigma-70 region 2 insig. 31 80
  Cellulophaga baltica 18 M666_RS04730 sigma-70 family RNA polymerase sigma factor insig. 31 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1322 RNA polymerase sigma factor, sigma-70 family sig. 30 81
  Bacteroides ovatus ATCC 8483 BACOVA_00619 RNA polymerase sigma factor, sigma-70 family insig. 31 71
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12555 sigma-70 family RNA polymerase sigma factor insig. 26 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15130 RNA polymerase sigma factor insig. 30 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 28 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12535 RNA polymerase insig. 26 75
  Bacteroides ovatus ATCC 8483 BACOVA_00436 sigma-70, region 4 insig. 27 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24675 RNA polymerase insig. 27 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13615 RNA polymerase sigma factor insig. 25 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08105 RNA polymerase sigma factor insig. 27 79
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 23 92
  Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 23 76
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 23 77
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 23 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 25 83
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 25 76
  Ralstonia solanacearum GMI1000 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor insig. 23 76
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 26 72
  Bacteroides ovatus ATCC 8483 BACOVA_01132 sigma-70, region 4 insig. 24 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 22 85
  Bacteroides ovatus ATCC 8483 BACOVA_00098 RNA polymerase sigma-70 factor insig. 27 76
  Bacteroides stercoris CC31F HMPREF1181_RS01060 RNA polymerase sigma-70 factor insig. 26 83
  Pseudomonas fluorescens SBW25 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor insig. 23 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13305 sigma-70 family RNA polymerase sigma factor sig. 23 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 26 74
  Phocaeicola dorei CL03T12C01 ABI39_RS08655 RNA polymerase sigma-70 factor insig. 25 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 26 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 24 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13420 RNA polymerase sigma-70 factor insig. 24 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2168 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 71
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 27 76
  Pseudomonas protegens RBAN4 FABNJH_28815 sigK RNA polymerase sigma factor SigK insig. 24 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1974 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2751 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12860 RNA polymerase sigma-70 factor cofit 25 80
  Phocaeicola dorei CL03T12C01 ABI39_RS18115 RNA polymerase sigma-70 factor insig. 25 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 23 81
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 24 74
  Phocaeicola dorei CL03T12C01 ABI39_RS10300 RNA polymerase sigma-70 factor sig. 27 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 26 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11460 hypothetical protein insig. 25 67
  Bacteroides ovatus ATCC 8483 BACOVA_04399 Sigma-70 region 2 insig. 27 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12200 hypothetical protein insig. 29 61
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 28 63
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 25 74
  Alteromonas macleodii MIT1002 MIT1002_00882 Sigma-W factor insig. 22 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4327 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 32 37
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0453 RNA polymerase sigma factor, sigma-70 family insig. 26 82
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 23 83
  Bacteroides thetaiotaomicron VPI-5482 BT1617 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 83
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 25 65
  Pseudomonas segetis P6 ACVTMO_RS10610 RNA polymerase sigma factor insig. 23 81
  Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 25 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 25 86
  Bacteroides ovatus ATCC 8483 BACOVA_00923 RNA polymerase sigma-70 factor insig. 28 40
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 24 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 24 79
  Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 23 81
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 22 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01465 RNA polymerase sigma-70 factor, ECF subfamily insig. 25 73
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 23 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 23 76
  Phocaeicola dorei CL03T12C01 ABI39_RS06310 RNA polymerase sigma-70 factor cofit 22 73
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 22 77
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 22 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 26 84
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 25 72
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 25 84
  Pseudomonas simiae WCS417 PS417_12610 RNA polymerase sigma factor sig. 22 78
  Phocaeicola dorei CL03T12C01 ABI39_RS10885 sigma-70 family RNA polymerase sigma factor insig. 30 37
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 23 81
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 23 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 22 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05690 RNA polymerase sigma-70 factor insig. 28 83
  Bacteroides thetaiotaomicron VPI-5482 BT4355 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 26 75
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 24 76
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 24 77
  Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 23 78
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 27 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3485 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 25 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1926 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00590 RNA polymerase sigma-70 factor insig. 23 66
  Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 22 78
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 23 76
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 30 61
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 22 77
  Bacteroides ovatus ATCC 8483 BACOVA_05151 RNA polymerase sigma-70 factor insig. 21 74
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 22 76
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 25 80
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 29 61
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1381 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05905 sigma-70 family RNA polymerase sigma factor insig. 24 83
  Phocaeicola dorei CL03T12C01 ABI39_RS18195 sigma-70 family RNA polymerase sigma factor insig. 24 76
  Bacteroides thetaiotaomicron VPI-5482 BT1877 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 24 83
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 21 81
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 21 66
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 26 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 24 70
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 20 76
  Phocaeicola dorei CL03T12C01 ABI39_RS08620 RNA polymerase sigma-70 factor insig. 23 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14720 RNA polymerase sigma factor insig. 27 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16705 RNA polymerase sigma factor strong 27 77
  Cellulophaga baltica 18 M666_RS13930 sigma-70 family RNA polymerase sigma factor cofit 21 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS19925 sigma-70 family RNA polymerase sigma factor insig. 21 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 20 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 27 64
  Cellulophaga baltica 18 M666_RS04155 sigma-70 family RNA polymerase sigma factor insig. 24 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10785 RNA polymerase sigma-70 factor sig. 23 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 22 82
  Bacteroides thetaiotaomicron VPI-5482 BT2778 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 21 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1738 RNA polymerase sigma-54 factor RpoN insig. 25 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12470 hypothetical protein insig. 26 87
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 23 69
  Pseudomonas protegens RBAN4 FABNJH_00920 RNA polymerase sigma factor insig. 23 80
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 26 64
  Cellulophaga baltica 18 M666_RS01775 RNA polymerase sigma-70 factor insig. 25 67
  Pseudomonas aeruginosa MRSN321 DY961_RS02510 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 25 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS33080 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 25 50
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 24 70
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 23 87
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 25 50
  Cellulophaga baltica 18 M666_RS08870 RNA polymerase sigma factor insig. 21 79
  Cellulophaga baltica 18 M666_RS13935 sigma-70 family RNA polymerase sigma factor no data 21 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06675 hypothetical protein insig. 25 80
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 24 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 24 85
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 26 62
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04910 RNA polymerase sigma-70 factor insig. 23 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09910 hypothetical protein insig. 23 70