| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dechlorosoma suillum PS | Dsui_2115 | | transcriptional regulator | insig. | 100 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS01720 | | LysR family transcriptional regulator | insig. | 61 | 99 |
| o | Ralstonia solanacearum GMI1000 | RS_RS22550 | | LysR family transcriptional regulator | insig. | 61 | 99 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17075 | | LysR family transcriptional regulator | insig. | 58 | 97 |
| o | Ralstonia solanacearum UW163 | UW163_RS18465 | | LysR family transcriptional regulator | insig. | 58 | 97 |
| o | Variovorax sp. SCN45 | GFF7344 | | Transcriptional regulator, LysR family | insig. | 58 | 99 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_1293 | | Transcriptional regulator, LysR family | insig. | 56 | 100 |
| | Variovorax sp. SCN45 | GFF2722 | | Transcriptional regulator, LysR family | insig. | 55 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS37730 | | LysR family transcriptional regulator | insig. | 48 | 97 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS11900 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004798 | | LysR family transcriptional regulator for bpeEF and oprC | insig. | 37 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38890 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11980 | | LysR family transcriptional regulator | insig. | 39 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01269 | | DNA-binding transcriptional regulator, LysR family | insig. | 35 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33310 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11620 | | LysR family transcriptional regulator | no data | 36 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33490 | | LysR substrate-binding domain-containing protein | insig. | 35 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31555 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_005448 | | LysR family transcriptional activator of dmlA | sig. | 36 | 90 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS20340 | | LysR family transcriptional regulator | insig. | 36 | 92 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01585 | | LysR family transcriptional regulator | insig. | 40 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 36 | 90 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Pseudomonas stutzeri RCH2 | Psest_0879 | | Transcriptional regulator | cofit | 38 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06700 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS06915 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 32 | 94 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 32 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39340 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18920 | | LysR family transcriptional regulator | cofit | 37 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS21625 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS11080 | | LysR family transcriptional regulator | insig. | 36 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 36 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10630 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20815 | | LysR family transcriptional regulator | cofit | 36 | 91 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_06315 | | LysR family transcriptional regulator | no data | 36 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23170 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Pantoea sp. MT58 | IAI47_16730 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS53115 | | LysR family transcriptional regulator | insig. | 36 | 92 |
| o | Pseudomonas sp. S08-1 | OH686_18510 | | Transcriptional regulator, LysR family | insig. | 35 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS26735 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10570 | | LysR family transcriptional regulator | strong | 36 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 34 | 91 |
| | Pseudomonas sp. RS175 | PFR28_03380 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 92 |
| | Escherichia coli ECOR38 | HEPCGN_07685 | lysR | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Rhizobium sp. OAE497 | ABIE40_RS04915 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Escherichia coli ECRC101 | MCAODC_28375 | lysR | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Escherichia coli ECRC98 | JDDGAC_12800 | lysR | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01575 | | transcriptional regulator, LysR family | insig. | 35 | 92 |
| | Escherichia coli ECRC99 | KEDOAH_18800 | lysR | LysR family transcriptional regulator | no data | 34 | 91 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS18980 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Escherichia fergusonii Becca | EFB2_03744 | | HTH-type transcriptional regulator PgrR | insig. | 34 | 91 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS01945 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_001933 | | DNA-binding transcriptional LysR family regulator | insig. | 35 | 92 |
| | Escherichia coli ECRC100 | OKFHMN_09160 | lysR | LysR family transcriptional regulator | cofit | 34 | 91 |
| | Escherichia coli ECRC102 | NIAGMN_07215 | lysR | LysR family transcriptional regulator | cofit | 34 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08890 | | LysR family transcriptional regulator | cofit | 33 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS20290 | | LysR family transcriptional regulator | cofit | 32 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS01505 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 35 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS02245 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| o | Agrobacterium fabrum C58 | Atu5184 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3914 | | Transcriptional regulator, LysR family | insig. | 35 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS00325 | | LysR family transcriptional regulator | cofit | 35 | 91 |
| | Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 31 | 93 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09740 | | LysR family transcriptional regulator | strong | 33 | 98 |
| | Ralstonia solanacearum UW163 | UW163_RS03840 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1291 | | Transcriptional regulator, LysR family | insig. | 33 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25135 | | transcriptional regulator | insig. | 33 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05000 | | LysR family transcriptional regulator | strong | 35 | 91 |
| | Ralstonia solanacearum GMI1000 | RS_RS08735 | | LysR family transcriptional regulator | sig. | 34 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS22650 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS23200 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23625 | | LysR family transcriptional regulator | strong | 35 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20495 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18390 | | LysR family transcriptional regulator | strong | 31 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS20740 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| | Lysobacter sp. OAE881 | ABIE51_RS10670 | | LysR family transcriptional regulator | insig. | 35 | 91 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5561 | | LysR-family transcriptional regulator clustered with PA0057 | insig. | 35 | 92 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04830 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| | Methylophilus sp. DMC18 | GFF957 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 94 |
| | Pectobacterium carotovorum WPP14 | HER17_RS03700 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_29255 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Pseudomonas sp. DMC3 | GFF2674 | | HTH-type transcriptional regulator PgrR | cofit | 30 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00595 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS13925 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23240 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01260 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS14570 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Variovorax sp. SCN45 | GFF672 | | Transcriptional regulator, LysR family | insig. | 34 | 93 |
| | Pseudomonas putida KT2440 | PP_1853 | | Transcriptional regulator, LysR family | insig. | 31 | 94 |
| | Dechlorosoma suillum PS | Dsui_2090 | | transcriptional regulator | insig. | 32 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_002310 | | DNA-binding transcriptional LysR family regulator | sig. | 35 | 91 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 35 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20825 | | LysR family transcriptional regulator | cofit | 34 | 93 |
| | Serratia liquefaciens MT49 | IAI46_20535 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05240 | | transcriptional regulator, LysR family | insig. | 35 | 91 |