Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Bacteroides thetaiotaomicron VPI-5482 | BT3768 | | transcriptional regulator (NCBI ptt file) | strong | 100 | 100 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_03606 | | transcriptional regulator, AraC family | strong | 94 | 100 |
o | Bacteroides stercoris CC31F | HMPREF1181_RS03525 | | helix-turn-helix transcriptional regulator | sig. | 83 | 100 |
o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS08915 | | AraC family transcriptional regulator | strong | 68 | 98 |
o | Phocaeicola dorei CL03T12C01 | ABI39_RS03035 | | AraC family transcriptional regulator | cofit | 68 | 98 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS01750 | | AraC family transcriptional regulator | insig. | 44 | 97 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2910 | | transcriptional regulator (NCBI ptt file) | insig. | 43 | 95 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS17590 | | AraC family transcriptional regulator | insig. | 42 | 94 |
o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08470 | | AraC family transcriptional regulator | insig. | 38 | 95 |
o | Sinorhizobium meliloti 1021 | SM_b21419 | | AraC family transcriptional regulator | insig. | 32 | 95 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS20010 | | AraC family ligand binding domain-containing protein | insig. | 40 | 53 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS20015 | | helix-turn-helix transcriptional regulator | insig. | 42 | 41 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23320 | | AraC family transcriptional regulator | insig. | 28 | 83 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08755 | | AraC family transcriptional regulator | insig. | 26 | 85 |
| Rhizobium sp. OAE497 | ABIE40_RS16855 | | helix-turn-helix domain-containing protein | insig. | 26 | 80 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12250 | | helix-turn-helix domain-containing protein | insig. | 31 | 78 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16455 | | AraC family transcriptional regulator | insig. | 26 | 78 |
| Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 27 | 62 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4396 | | transcriptional regulator (NCBI ptt file) | sig. | 25 | 82 |
| Marinobacter adhaerens HP15 | HP15_905 | | protein containing helix-turn-helix, AraC domain | insig. | 26 | 78 |
| Pseudomonas putida KT2440 | PP_4482 | | Transcriptional regulator, AraC family | strong | 37 | 33 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3667 | | transcriptional regulator (NCBI ptt file) | insig. | 34 | 46 |
| Pseudomonas fluorescens SBW25 | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 37 | 33 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 37 | 33 |
| Pseudomonas sp. RS175 | PFR28_03284 | | HTH-type transcriptional regulator CdhR | strong | 37 | 33 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1968 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 37 | 33 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3437 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 37 | 33 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5664 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 37 | 33 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 37 | 33 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 37 | 33 |
| Pseudomonas simiae WCS417 | PS417_21720 | | AraC family transcriptional regulator | no data | 37 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_03035 | | AraC family transcriptional regulator | strong | 37 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_18720 | | AraC family transcriptional regulator | strong | 37 | 33 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 28 | 52 |
| Pseudomonas sp. S08-1 | OH686_21280 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 36 | 33 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS01165 | | helix-turn-helix transcriptional regulator | insig. | 31 | 47 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07690 | | AraC family transcriptional regulator | sig. | 35 | 33 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06477 | | transcriptional regulator, AraC family | insig. | 35 | 33 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS03430 | | AraC family transcriptional regulator | insig. | 24 | 90 |
| Paraburkholderia graminis OAS925 | ABIE53_001768 | | transcriptional regulator GlxA family with amidase domain | strong | 35 | 33 |
| Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 33 | 33 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS23380 | | GlxA family transcriptional regulator | insig. | 34 | 33 |
| Paraburkholderia graminis OAS925 | ABIE53_006161 | | transcriptional regulator GlxA family with amidase domain | insig. | 33 | 33 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00290 | | helix-turn-helix transcriptional regulator | insig. | 31 | 47 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02454 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 33 | 33 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08455 | | AraC family transcriptional regulator | insig. | 27 | 62 |
| Azospirillum sp. SherDot2 | MPMX19_03260 | | HTH-type transcriptional regulator CdhR | insig. | 31 | 34 |
| Burkholderia phytofirmans PsJN | BPHYT_RS25095 | | AraC family transcriptional regulator | insig. | 33 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26250 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| Pseudomonas fluorescens SBW25 | PFLU_RS18110 | | GlxA family transcriptional regulator | insig. | 32 | 40 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS18110 | | GlxA family transcriptional regulator | insig. | 32 | 40 |
| Phaeobacter inhibens DSM 17395 | PGA1_c02800 | | putative transcriptional regulator, AraC family | strong | 24 | 79 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03562 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 31 | 48 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13580 | | response regulator | strong | 28 | 53 |
| Azospirillum sp. SherDot2 | MPMX19_04720 | | HTH-type transcriptional activator RhaS | insig. | 32 | 34 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05520 | | AraC family transcriptional regulator | insig. | 28 | 53 |
| Rahnella sp. WP5 | EX31_RS06920 | | GlxA family transcriptional regulator | insig. | 35 | 33 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 24 | 62 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS09170 | | response regulator | cofit | 28 | 53 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2539 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 33 | 34 |
| Dickeya dadantii 3937 | DDA3937_RS20915 | | DNA-binding transcriptional regulator | insig. | 29 | 53 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 31 | 33 |
| Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 28 | 43 |
| Klebsiella michiganensis M5al | BWI76_RS11895 | | AraC family transcriptional regulator | sig. | 29 | 45 |
| Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 34 | 30 |
| Klebsiella michiganensis M5al | BWI76_RS10325 | | AraC family transcriptional regulator | insig. | 23 | 79 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2751 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 31 | 33 |
| Dickeya dianthicola 67-19 | HGI48_RS00330 | | XylR family transcriptional regulator | insig. | 29 | 53 |
| Dickeya dianthicola ME23 | DZA65_RS00330 | | DNA-binding transcriptional regulator | insig. | 29 | 53 |
| Azospirillum sp. SherDot2 | MPMX19_04709 | | HTH-type transcriptional regulator CdhR | insig. | 30 | 36 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27265 | | AraC family transcriptional regulator | insig. | 28 | 46 |
| Klebsiella michiganensis M5al | BWI76_RS24370 | | hypothetical protein | insig. | 36 | 34 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS08030 | | GlxA family transcriptional regulator | insig. | 30 | 33 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS06070 | | helix-turn-helix domain-containing protein | insig. | 33 | 29 |
| Pseudomonas sp. RS175 | PFR28_04161 | | HTH-type transcriptional regulator CdhR | strong | 31 | 33 |
| Pseudomonas putida KT2440 | PP_0298 | | AraC-family transcriptional regulator | strong | 31 | 33 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13765 | | GlxA family transcriptional regulator | insig. | 31 | 34 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_25050 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16210 | | AraC family transcriptional regulator | insig. | 34 | 34 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1249 | | Transcriptional regulator, AraC family | insig. | 33 | 35 |
| Dinoroseobacter shibae DFL-12 | Dshi_2118 | | transcriptional regulator, AraC family (RefSeq) | insig. | 33 | 36 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1425 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 32 | 34 |
| Bacteroides stercoris CC31F | HMPREF1181_RS08895 | | response regulator | insig. | 31 | 29 |
| Ralstonia solanacearum GMI1000 | RS_RS05455 | | GlxA family transcriptional regulator | sig. | 29 | 34 |
| Klebsiella michiganensis M5al | BWI76_RS27045 | | XylR family transcriptional regulator | strong | 29 | 54 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2755 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 32 | 33 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS05725 | | response regulator | insig. | 34 | 27 |
| Bacteroides stercoris CC31F | HMPREF1181_RS08885 | | response regulator | strong | 32 | 37 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_25045 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4111 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | strong | 32 | 35 |
| Pseudomonas fluorescens SBW25 | PFLU_RS27955 | | GlxA family transcriptional regulator | insig. | 31 | 33 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS27955 | | GlxA family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4708 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 31 | 33 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4708 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 31 | 33 |
| Pseudomonas simiae WCS417 | PS417_26305 | | AraC family transcriptional regulator | sig. | 31 | 33 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1090 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 31 | 33 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2425 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_07770 | | AraC family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_13825 | | AraC family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4686 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | strong | 31 | 33 |