Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Rhodospirillum rubrum S1H | Rru_A0691 | | Predicted signal transduction protein (NCBI) | insig. | 100 | 100 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS14875 | | response regulator | insig. | 44 | 95 |
| Magnetospirillum magneticum AMB-1 | AMB_RS05335 | | response regulator | cofit | 42 | 80 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU0330 | | response regulator (TIGR) | strong | 37 | 91 |
o | Dickeya dadantii 3937 | DDA3937_RS10185 | | HDOD domain-containing protein | insig. | 33 | 91 |
o | Dickeya dianthicola ME23 | DZA65_RS10635 | | HDOD domain-containing protein | insig. | 32 | 91 |
o | Dickeya dianthicola 67-19 | HGI48_RS10215 | | HDOD domain-containing protein | insig. | 31 | 91 |
o | Lysobacter sp. OAE881 | ABIE51_RS16205 | | HDOD domain-containing protein | insig. | 29 | 90 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1072.1 | | response regulator | insig. | 30 | 97 |
| Pseudomonas simiae WCS417 | PS417_05440 | | chemotaxis protein CheY | insig. | 35 | 51 |
| Alteromonas macleodii MIT1002 | MIT1002_03637 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 38 | 35 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3555.1 | | hypothetical protein | insig. | 33 | 52 |
o | Shewanella oneidensis MR-1 | SO2538 | | response regulator (NCBI ptt file) | insig. | 24 | 86 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3166 | | HD domain protein | insig. | 30 | 51 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_05500 | | response regulator | insig. | 25 | 85 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2357 | | HD domain protein (TIGR) | sig. | 30 | 51 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5467 | | Response regulator | sig. | 39 | 28 |
| Paraburkholderia graminis OAS925 | ABIE53_006006 | | adenylate cyclase | sig. | 38 | 30 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1183 | | HD domain protein (TIGR) | insig. | 31 | 50 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_17715 | | chemotaxis protein CheY | insig. | 39 | 28 |
| Pseudomonas sp. RS175 | PFR28_03482 | | Sensor histidine kinase RcsC | cofit | 39 | 28 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02781 | | Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains | insig. | 38 | 30 |
| Pseudomonas putida KT2440 | PP_2942 | | Response regulator | insig. | 32 | 55 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_788 | | Response regulator | insig. | 38 | 29 |
| Pseudomonas sp. S08-1 | OH686_08910 | | Phytochrome-like protein / Cph2 | cofit | 36 | 31 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16190 | | chemotaxis protein CheY | insig. | 36 | 29 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05530 | | two-component system response regulator | cofit | 37 | 30 |
| Dechlorosoma suillum PS | Dsui_1890 | | diguanylate cyclase (GGDEF) domain-containing protein | insig. | 35 | 33 |
| Dechlorosoma suillum PS | Dsui_1888 | | putative domain HDIG-containing protein | cofit | 29 | 54 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS14680 | | histidine kinase | sig. | 31 | 56 |
| Shewanella oneidensis MR-1 | SO2541 | | response regulator (NCBI ptt file) | insig. | 35 | 29 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_3076 | | metal dependent phosphohydrolase (RefSeq) | strong | 30 | 46 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05525 | | response regulator | insig. | 36 | 28 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05525 | | response regulator | insig. | 36 | 28 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3168 | | Response regulator | insig. | 28 | 80 |
| Shewanella oneidensis MR-1 | SO2539 | | response regulator (NCBI ptt file) | insig. | 36 | 31 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3021 | | HDIG domain protein (TIGR) | insig. | 29 | 58 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2068 | | HD domain protein (TIGR) | insig. | 30 | 57 |
| Dechlorosoma suillum PS | Dsui_2046 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 37 | 30 |
| Dechlorosoma suillum PS | Dsui_3334 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 34 | 32 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3165 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 36 | 32 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2245 | | conserved domain protein | insig. | 28 | 54 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2245 | | conserved domain protein | insig. | 28 | 54 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4653 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | insig. | 30 | 53 |
| Pseudomonas sp. S08-1 | OH686_08945 | | hypothetical protein | cofit | 36 | 28 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_3011 | | metal dependent phosphohydrolase (RefSeq) | insig. | 29 | 51 |
| Lysobacter sp. OAE881 | ABIE51_RS16595 | | EAL domain-containing protein | cofit | 32 | 31 |
| Magnetospirillum magneticum AMB-1 | AMB_RS21205 | | response regulator | insig. | 35 | 28 |
| Dechlorosoma suillum PS | Dsui_1886 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 32 | 46 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2768.1 | | hypothetical protein | strong | 33 | 32 |
| Dechlorosoma suillum PS | Dsui_2396 | | putative domain HDIG-containing protein | insig. | 30 | 60 |
| Ralstonia solanacearum PSI07 | RPSI07_RS05625 | | two-component system response regulator | insig. | 39 | 28 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18645 | | chemotaxis protein CheY | insig. | 39 | 29 |
| Dechlorosoma suillum PS | Dsui_3335 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 34 | 37 |
| Dechlorosoma suillum PS | Dsui_3333 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 34 | 36 |
| Alteromonas macleodii MIT1002 | MIT1002_01657 | | HDOD domain protein | sig. | 26 | 57 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS16850 | | HD domain-containing phosphohydrolase | insig. | 38 | 28 |
| Dickeya dadantii 3937 | DDA3937_RS10180 | | response regulator | insig. | 36 | 35 |
| Pseudomonas sp. S08-1 | OH686_08940 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 36 | 28 |
| Dechlorosoma suillum PS | Dsui_2339 | | putative domain HDIG-containing protein | cofit | 27 | 50 |
| Dickeya dianthicola 67-19 | HGI48_RS10210 | | response regulator | insig. | 36 | 35 |
| Dickeya dianthicola ME23 | DZA65_RS10630 | | response regulator | insig. | 36 | 35 |
| Rhodospirillum rubrum S1H | Rru_A0692 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 36 | 36 |
| Magnetospirillum magneticum AMB-1 | AMB_RS05325 | | chemotaxis protein CheY | insig. | 37 | 26 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2242 | | putative signal transduction protein (RefSeq) | insig. | 31 | 54 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1078 | | hypothetical protein | no data | 29 | 49 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_13265 | | histidine kinase | insig. | 26 | 51 |
| Pseudomonas sp. RS175 | PFR28_04273 | | hypothetical protein | insig. | 26 | 51 |
| Dechlorosoma suillum PS | Dsui_0440 | | HDOD domain-containing protein | insig. | 25 | 53 |
| Pseudomonas simiae WCS417 | PS417_26875 | | histidine kinase | sig. | 28 | 49 |
| Marinobacter adhaerens HP15 | HP15_3664 | | response regulator receiver modulated metal dependent phosphohydrolase | cofit | 26 | 47 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0769 | | metal dependent phosphohydrolase (RefSeq) | cofit | 25 | 56 |
| Alteromonas macleodii MIT1002 | MIT1002_02996 | | HDOD domain protein | insig. | 27 | 46 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4568 | | Predicted signal transduction protein | insig. | 26 | 51 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_978 | | Predicted signal transduction protein | insig. | 24 | 49 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20000 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 28 | 32 |
| Pseudomonas fluorescens SBW25 | PFLU_RS28520 | | HDOD domain-containing protein | insig. | 28 | 49 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS28520 | | HDOD domain-containing protein | insig. | 28 | 49 |
| Marinobacter adhaerens HP15 | HP15_796 | | signal transduction protein | insig. | 25 | 53 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS13145 | | histidine kinase | insig. | 29 | 57 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4652 | | Conserved domain protein | insig. | 26 | 63 |
| Azospirillum sp. SherDot2 | MPMX19_05290 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 33 | 29 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1135 | | metal dependent phosphohydrolase (RefSeq) | sig. | 29 | 52 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2308 | | Predicted signal transduction protein | insig. | 24 | 51 |
| Pseudomonas sp. S08-1 | OH686_08925 | | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | cofit | 30 | 27 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4762 | | conserved hypothetical protein | insig. | 25 | 49 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4762 | | conserved hypothetical protein | insig. | 25 | 49 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05525 | | transcriptional regulator | insig. | 27 | 51 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09930 | | hybrid sensor histidine kinase/response regulator | cofit | 34 | 32 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0903 | | HD domain protein (TIGR) | insig. | 30 | 53 |
| Variovorax sp. SCN45 | GFF757 | | hypothetical protein | insig. | 26 | 52 |
| Dechlorosoma suillum PS | Dsui_1154 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 31 | 31 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1260 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 29 | 31 |
| Dechlorosoma suillum PS | Dsui_1885 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 39 | 29 |
| Shewanella sp. ANA-3 | Shewana3_3956 | | putative signal transduction protein (RefSeq) | insig. | 23 | 53 |
| Shewanella oneidensis MR-1 | SO4563 | | conserved hypothetical protein (NCBI ptt file) | insig. | 23 | 53 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_14220 | | HDOD domain-containing protein | insig. | 26 | 52 |
| Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 32 | 29 |
| Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 32 | 29 |
| Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 32 | 29 |