Conservation of cofitness between Xcc-8004.4829.1 and Xcc-8004.4530.1 in Xanthomonas campestris pv. campestris strain 8004

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4829.1 Transamidase GatB domain protein 1.0 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.33 12
Lysobacter sp. OAE881 0.78 ABIE51_RS19135 GatB/YqeY domain-containing protein 0.63 ABIE51_RS17990 dethiobiotin synthase low > 62
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_16595 yqeY glutamyl-tRNA amidotransferase 0.46 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Rhodanobacter denitrificans MT42 0.68 LRK55_RS06780 GatB/YqeY domain-containing protein 0.44 LRK55_RS06915 dethiobiotin synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS07040 GatB/YqeY domain-containing protein 0.45 LRK54_RS07180 dethiobiotin synthase low > 59
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_06010 hypothetical protein 0.32 H281DRAFT_02096 dethiobiotin synthetase low > 103
Paraburkholderia graminis OAS925 0.63 ABIE53_004864 uncharacterized protein YqeY 0.32 ABIE53_000578 dethiobiotin synthetase low > 113
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12810 GatB/YqeY domain-containing protein 0.49 ABZR86_RS12700 dethiobiotin synthase low > 74
Acidovorax sp. GW101-3H11 0.62 Ac3H11_3257 Transamidase GatB domain protein 0.40 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) low > 79
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS33550 aspartyl-tRNA amidotransferase subunit B 0.38 BPHYT_RS02155 dithiobiotin synthetase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS03685 GatB/YqeY domain-containing protein 0.38 RALBFv3_RS00825 dethiobiotin synthase — —
Ralstonia solanacearum UW163 0.61 UW163_RS09985 GatB/YqeY domain-containing protein 0.38 UW163_RS14160 dethiobiotin synthase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS15615 GatB/YqeY domain-containing protein 0.37 ABZR87_RS12345 dethiobiotin synthase low > 80
Ralstonia solanacearum GMI1000 0.61 RS_RS11130 GatB/YqeY domain-containing protein 0.35 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3656 Transamidase GatB domain protein 0.44 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) — —
Variovorax sp. SCN45 0.59 GFF4711 Transamidase GatB domain protein 0.41 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) low > 127
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS04355 aspartyl-tRNA amidotransferase subunit B 0.42 HSERO_RS12255 dethiobiotin synthetase low > 78
Ralstonia solanacearum PSI07 0.57 RPSI07_RS13545 GatB/YqeY domain-containing protein 0.35 RPSI07_RS16695 dethiobiotin synthase low > 81
Variovorax sp. OAS795 0.57 ABID97_RS20660 GatB/YqeY domain-containing protein 0.40 ABID97_RS16255 dethiobiotin synthase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS14980 glutamyl-tRNA amidotransferase 0.35 RR42_RS00935 dethiobiotin synthetase — —
Shewanella amazonensis SB2B 0.53 Sama_0825 hypothetical protein (RefSeq) 0.35 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15200 GatB/YqeY domain-containing protein 0.30 QEN71_RS01090 dethiobiotin synthase — —
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02755 glutamyl-tRNA amidotransferase 0.40 CSW01_05660 dethiobiotin synthase low > 62
Shewanella loihica PV-4 0.51 Shew_0998 GatB/Yqey domain-containing protein (RefSeq) 0.38 Shew_1722 dethiobiotin synthase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0821 Uncharacterized conserved protein 0.33 B158DRAFT_0869 dethiobiotin synthase — —
Shewanella oneidensis MR-1 0.49 SO1287 conserved hypothetical protein (NCBI ptt file) 0.38 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.44 HP15_2793 GatB/Yqey domain protein 0.41 HP15_2482 dethiobiotin synthetase low > 73
Alteromonas macleodii MIT1002 0.44 MIT1002_00735 hypothetical protein 0.34 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 low > 70
Shewanella sp. ANA-3 0.43 Shewana3_3085 GatB/Yqey domain-containing protein (RefSeq) 0.39 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Dechlorosoma suillum PS 0.41 Dsui_1211 hypothetical protein 0.40 Dsui_2884 dethiobiotin synthase low > 51
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0497 GatB/YqeY family protein (RefSeq) 0.18 DvMF_1009 dethiobiotin synthase (RefSeq) low > 51

Not shown: 26 genomes with orthologs for Xcc-8004.4829.1 only; 40 genomes with orthologs for Xcc-8004.4530.1 only