Conservation of cofitness between Xcc-8004.3118.1 and Xcc-8004.4085.1 in Xanthomonas campestris pv. campestris strain 8004

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 1.0 Xcc-8004.4085.1 Sulfate transport system permease protein CysW 0.63 5
Lysobacter sp. OAE881 0.79 ABIE51_RS07790 CinA family protein 0.48 ABIE51_RS01845 sulfate ABC transporter permease subunit CysW low > 62
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS00655 CinA family protein 0.47 ABZR86_RS02890 sulfate ABC transporter permease subunit CysW low > 74
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_03735 pncC damage-inducible protein CinA 0.50 OKGIIK_10925 cysW sulfate ABC transporter permease subunit CysW low > 52
Dickeya dianthicola 67-19 0.54 HGI48_RS16360 nicotinamide-nucleotide amidase 0.44 HGI48_RS15980 sulfate ABC transporter permease subunit CysW low > 71
Escherichia coli ECOR27 0.52 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.41 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.41 OHPLBJKB_01300 Sulfate transport system permease protein CysW low > 73
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.41 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW low > 55
Escherichia coli BL21 0.52 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.41 ECD_02323 sulfate/thiosulfate ABC transporter permease low > 61
Escherichia coli BW25113 0.52 b2700 ygaD competence damage-inducible protein A (NCBI) 0.41 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) 0.17 68
Escherichia coli ECRC62 0.52 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.41 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Marinobacter adhaerens HP15 0.52 HP15_1046 competence damage-inducible protein A 0.45 HP15_1346 sulfate ABC transporter, inner membrane subunit CysW low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.40 MPMX20_03315 Sulfate transport system permease protein CysW low > 85
Escherichia coli ECRC98 0.52 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.41 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW low > 86
Escherichia fergusonii Becca 0.52 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.41 EFB2_01454 Sulfate transport system permease protein CysW low > 86
Escherichia coli ECOR38 0.52 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.41 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2786 amidohydrolase, PncC family 0.40 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW 0.40 39
Escherichia coli ECRC101 0.52 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.41 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Escherichia coli ECRC100 0.52 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.41 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW low > 80
Escherichia coli ECRC99 0.52 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.41 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC102 0.52 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.41 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.41 GFF2057 Sulfate transport system permease protein CysW low > 78
Klebsiella michiganensis M5al 0.49 BWI76_RS22185 hypothetical protein 0.42 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit low > 92
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27055 CinA family protein 0.49 QEN71_RS22580 sulfate ABC transporter permease subunit CysW low > 153
Serratia liquefaciens MT49 0.47 IAI46_03835 nicotinamide-nucleotide amidase 0.40 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW low > 86
Erwinia tracheiphila SCR3 0.46 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.39 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW low > 74
Pectobacterium carotovorum WPP14 0.46 HER17_RS05040 nicotinamide-nucleotide amidase 0.47 HER17_RS05680 sulfate ABC transporter permease subunit CysW low > 75
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1377 CinA, C-terminal 0.48 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1377 CinA, C-terminal 0.48 Psyr_0082 Binding-protein-dependent transport systems inner membrane component 0.30 73
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02870 CinA family protein 0.36 CSW01_02860 sulfate ABC transporter permease subunit CysW low > 62
Pantoea sp. MT58 0.45 IAI47_04295 nicotinamide-nucleotide amidase 0.41 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW low > 76
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06305 nicotinamide-nucleotide amidase 0.48 H281DRAFT_00780 sulfate transport system permease protein low > 103
Dechlorosoma suillum PS 0.43 Dsui_0710 competence/damage-inducible protein CinA-like protein 0.51 Dsui_0259 sulfate ABC transporter, permease protein CysW low > 51
Rahnella sp. WP5 0.43 EX31_RS07805 nicotinamide-nucleotide amidase 0.41 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW low > 89
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01580 CinA family protein 0.52 ABZR87_RS11545 sulfate ABC transporter permease subunit CysW low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.52 GFF5098 Sulfate transport system permease protein CysW low > 90
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17625 damage-inducible protein CinA 0.52 RR42_RS12255 sulfate/thiosulfate transporter permease subunit low > 128
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05915 CinA family protein 0.52 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW low > 76
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16840 competence damage-inducible protein A 0.55 HSERO_RS08235 sulfate ABC transporter permease low > 78
Ralstonia solanacearum UW163 0.42 UW163_RS07710 CinA family protein 0.52 UW163_RS13420 sulfate ABC transporter permease subunit CysW — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS11330 CinA family protein 0.52 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13860 CinA family protein 0.51 RS_RS06750 sulfate ABC transporter permease subunit CysW — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS14405 competence damage-inducible protein A 0.56 AZOBR_RS19275 sulfate/thiosulfate transporter permease subunit low > 97
Pseudomonas putida KT2440 0.41 PP_1628 NMN amidohydrolase 0.50 PP_5169 sulfate ABC transporter, inner membrane subunit CysW low > 96
Azospirillum sp. SherDot2 0.40 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.56 MPMX19_04168 Sulfate transport system permease protein CysW low > 112
Magnetospirillum magneticum AMB-1 0.40 AMB_RS12830 CinA family protein 0.49 AMB_RS10135 sulfate ABC transporter permease subunit CysW — —
Sinorhizobium meliloti 1021 0.39 SMc01039 hypothetical protein 0.52 SM_b21131 sulfate ABC transporter permease low > 103
Acidovorax sp. GW101-3H11 0.39 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.51 Ac3H11_910 Sulfate transport system permease protein CysW low > 79
Rhizobium sp. OAE497 0.37 ABIE40_RS09070 CinA family protein 0.47 ABIE40_RS24580 sulfate ABC transporter permease subunit CysW low > 107
Variovorax sp. SCN45 0.37 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.57 GFF1289 Sulfate transport system permease protein CysW low > 127
Agrobacterium fabrum C58 0.36 Atu1442 competence/damage-inducible protein CinA 0.52 Atu0822 ABC transporter, membrane spanning protein low > 89
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.51 CCNA_01669 sulfate transport system permease protein cysW low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.51 CCNA_01669 sulfate transport system permease protein cysW low > 66
Bosea sp. OAE506 0.26 ABIE41_RS16805 CinA family protein 0.49 ABIE41_RS15350 sulfate ABC transporter permease subunit CysW low > 77

Not shown: 27 genomes with orthologs for Xcc-8004.3118.1 only; 8 genomes with orthologs for Xcc-8004.4085.1 only