Conservation of cofitness between Xcc-8004.2620.1 and Xcc-8004.2616.1 in Xanthomonas campestris pv. campestris strain 8004

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2620.1 NfuA Fe-S protein maturation 1.0 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.45 13
Lysobacter sp. OAE881 0.74 ABIE51_RS11785 NfuA family Fe-S biogenesis protein 0.78 ABIE51_RS11800 RluA family pseudouridine synthase — —
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS02740 NfuA family Fe-S biogenesis protein 0.44 ABZR86_RS02725 RluA family pseudouridine synthase 0.47 13
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS17905 NfuA family Fe-S biogenesis protein 0.46 LRK54_RS17895 RluA family pseudouridine synthase low > 59
Rhodanobacter denitrificans MT42 0.56 LRK55_RS17760 NfuA family Fe-S biogenesis protein 0.46 LRK55_RS17750 RluA family pseudouridine synthase low > 63
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_07395 NfuA family Fe-S biogenesis protein 0.46 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF603 NfuA Fe-S protein maturation 0.42 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.40 EX28DRAFT_4128 IscR-regulated protein YhgI 0.42 EX28DRAFT_1844 pseudouridine synthase, RluA family — —
Escherichia coli BW25113 0.40 b3414 gntY predicted gluconate transport associated protein (NCBI) 0.42 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECOR38 0.40 HEPCGN_15800 NfuA family Fe-S biogenesis protein 0.42 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Escherichia fergusonii Becca 0.40 EFB2_00414 Fe/S biogenesis protein NfuA 0.42 EFB2_02889 Ribosomal large subunit pseudouridine synthase C low > 86
Escherichia coli ECRC62 0.40 BNILDI_02740 NfuA family Fe-S biogenesis protein 0.42 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Escherichia coli ECOR27 0.40 NOLOHH_08775 NfuA family Fe-S biogenesis protein 0.42 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Escherichia coli BL21 0.40 ECD_03266 Fe/S biogenesis protein, putative scaffold/chaperone protein 0.42 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase low > 61
Escherichia coli ECRC98 0.40 JDDGAC_20620 NfuA family Fe-S biogenesis protein 0.42 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Escherichia coli Nissle 1917 0.40 ECOLIN_RS19500 Fe-S biogenesis protein NfuA 0.42 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 55
Escherichia coli ECRC99 0.40 KEDOAH_11150 NfuA family Fe-S biogenesis protein 0.42 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC101 0.40 MCAODC_07520 NfuA family Fe-S biogenesis protein 0.42 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Escherichia coli ECRC102 0.40 NIAGMN_14760 NfuA family Fe-S biogenesis protein 0.42 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Enterobacter sp. TBS_079 0.40 MPMX20_04301 Fe/S biogenesis protein NfuA 0.42 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_00289 Fe/S biogenesis protein NfuA 0.42 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C low > 73
Escherichia coli ECRC100 0.40 OKFHMN_16990 NfuA family Fe-S biogenesis protein 0.42 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 80
Klebsiella michiganensis M5al 0.39 BWI76_RS26620 Fe-S biogenesis protein NfuA 0.42 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase low > 92
Pectobacterium carotovorum WPP14 0.39 HER17_RS01545 Fe-S biogenesis protein NfuA 0.40 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Dickeya dadantii 3937 0.39 DDA3937_RS19655 Fe-S biogenesis protein NfuA 0.38 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Erwinia tracheiphila SCR3 0.39 LU632_RS22985 nfuA Fe-S biogenesis protein NfuA 0.42 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Dickeya dianthicola 67-19 0.39 HGI48_RS19785 Fe-S biogenesis protein NfuA 0.38 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 71
Pantoea sp. MT58 0.39 IAI47_01780 Fe-S biogenesis protein NfuA 0.42 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 76
Dickeya dianthicola ME23 0.39 DZA65_RS20875 Fe-S biogenesis protein NfuA 0.38 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Marinobacter adhaerens HP15 0.38 HP15_1791 yhgI protein 0.43 HP15_2221 pseudouridine synthase, RluA family — —
Alteromonas macleodii MIT1002 0.38 MIT1002_04019 Fe/S biogenesis protein NfuA 0.42 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C — —
Serratia liquefaciens MT49 0.38 IAI46_23835 Fe-S biogenesis protein NfuA 0.39 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Shewanella amazonensis SB2B 0.38 Sama_3502 putative DNA uptake protein (RefSeq) 0.42 Sama_1988 pseudouridylate synthase (RefSeq) — —
Shewanella sp. ANA-3 0.37 Shewana3_4003 putative DNA uptake protein (RefSeq) 0.40 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) — —
Shewanella loihica PV-4 0.37 Shew_0106 putative DNA uptake protein (RefSeq) 0.41 Shew_1594 RluA family pseudouridine synthase (RefSeq) — —
Rahnella sp. WP5 0.36 EX31_RS04925 Fe-S biogenesis protein NfuA 0.42 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 89
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13725 Fe-S biogenesis protein NfuA 0.43 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0853 IscR-regulated protein YhgI 0.41 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) — —
Pseudomonas putida KT2440 0.34 PP_2378 Fe/S biogenesis protein NfuA 0.43 PP_1906 ribosomal large subunit pseudouridine synthase C 0.24 66
Acinetobacter radioresistens SK82 0.34 MPMX26_02345 Fe/S biogenesis protein NfuA 0.34 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C — —
Pseudomonas stutzeri RCH2 0.33 Psest_2104 IscR-regulated protein YhgI 0.43 Psest_1680 pseudouridine synthase, RluA family — —
Pseudomonas sp. S08-1 0.33 OH686_03315 [4Fe-4S] cluster carrier protein NfuA 0.43 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_21625 Fe/S biogenesis protein NfuA 0.41 AO353_01405 23S rRNA pseudouridylate synthase low > 101
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_00535 Fe/S biogenesis protein NfuA 0.42 AO356_20125 23S rRNA pseudouridylate synthase — —
Pseudomonas sp. RS175 0.32 PFR28_01371 Fe/S biogenesis protein NfuA 0.42 PFR28_03018 Ribosomal large subunit pseudouridine synthase C — —
Pseudomonas simiae WCS417 0.32 PS417_12320 amino acid ABC transporter substrate-binding protein 0.42 PS417_21480 23S rRNA pseudouridylate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_2066 NfuA Fe-S protein maturation 0.42 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2849 NfuA Fe-S protein maturation 0.40 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS13010 Fe-S biogenesis protein NfuA 0.42 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_5659 NfuA Fe-S protein maturation 0.40 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS13010 Fe-S biogenesis protein NfuA 0.42 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal 0.43 Psyr_1639 ribosomal large subunit pseudouridine synthase C — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal 0.43 Psyr_1639 ribosomal large subunit pseudouridine synthase C — —

Not shown: 1 genomes with orthologs for Xcc-8004.2620.1 only; 30 genomes with orthologs for Xcc-8004.2616.1 only