Conservation of cofitness between TX73_019540 and TX73_023060 in Rhodopseudomonas palustris CGA009

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_023060 fatty-acid--CoA ligase 0.54 11
Ralstonia solanacearum PSI07 0.53 RPSI07_RS07505 FAD-binding oxidoreductase 0.54 RPSI07_RS16300 long-chain-fatty-acid--CoA ligase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03160 D-amino-acid dehydrogenase 0.51 H281DRAFT_00915 fatty-acyl-CoA synthase — —
Ralstonia solanacearum UW163 0.52 UW163_RS16930 FAD-binding oxidoreductase 0.54 UW163_RS14485 long-chain-fatty-acid--CoA ligase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS16195 FAD-binding oxidoreductase 0.54 RALBFv3_RS01175 long-chain-fatty-acid--CoA ligase low > 76
Paraburkholderia graminis OAS925 0.52 ABIE53_004136 D-amino-acid dehydrogenase 0.52 ABIE53_002150 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II low > 113
Pseudomonas putida KT2440 0.52 PP_3596 D-lysine oxidase 0.28 PP_0763 Medium-chain-fatty-acid CoA ligase low > 96
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS10270 D-amino acid dehydrogenase 0.51 BPHYT_RS09555 long-chain fatty acid--CoA ligase low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS12475 FAD-binding oxidoreductase 0.53 QEN71_RS21895 3-(methylthio)propionyl-CoA ligase low > 153
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS23145 FAD-binding oxidoreductase 0.55 ABZR87_RS12625 3-(methylthio)propionyl-CoA ligase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF267 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.52 GFF4586 3-methylmercaptopropionyl-CoA ligase (DmdB) low > 90
Ralstonia solanacearum GMI1000 0.23 RS_RS02525 FAD-dependent oxidoreductase 0.54 RS_RS08835 long-chain-fatty-acid--CoA ligase low > 80
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS16215 FAD-binding oxidoreductase 0.27 PFLU_RS04585 fatty acid--CoA ligase low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS16215 FAD-binding oxidoreductase 0.27 PFLU_RS04585 fatty acid--CoA ligase low > 109
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_3586 D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster 0.29 PfGW456L13_4890 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 87
Pseudomonas simiae WCS417 0.19 PS417_14320 FAD-dependent oxidoreductase 0.28 PS417_04540 long-chain fatty acid--CoA ligase low > 88
Rhodospirillum rubrum S1H 0.19 Rru_A2064 FAD dependent oxidoreductase (NCBI) 0.45 Rru_A1316 AMP-dependent synthetase and ligase (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS22955 D-amino acid dehydrogenase 0.27 HSERO_RS07975 AMP-binding protein low > 78
Phaeobacter inhibens DSM 17395 0.18 PGA1_c05140 D-amino acid dehydrogenase small subunit 0.42 PGA1_c35550 medium-chain-fatty-acid--CoA ligase AlkK low > 62
Azospirillum sp. SherDot2 0.18 MPMX19_04536 D-amino acid dehydrogenase 1 0.53 MPMX19_05975 3-methylmercaptopropionyl-CoA ligase low > 112
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS09075 amino acid dehydrogenase 0.55 RR42_RS11155 long-chain fatty acid--CoA ligase low > 128
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.27 Pf6N2E2_3244 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) 0.19 73
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.53 ABID97_RS15705 3-(methylthio)propionyl-CoA ligase low > 91
Pseudomonas sp. S08-1 0.16 OH686_13685 D-amino acid dehydrogenase 0.27 OH686_06325 Medium-chain-fatty-acid--CoA ligase 0.84 15
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_12620 amino acid dehydrogenase 0.27 AO356_06910 long-chain fatty acid--CoA ligase 0.34 24
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS08770 D-amino acid dehydrogenase 0.61 A4249_RS07965 long-chain-fatty-acid--CoA ligase low > 48
Pseudomonas sp. RS175 0.16 PFR28_04399 D-amino acid dehydrogenase 1 0.27 PFR28_03620 Long-chain-fatty-acid--CoA ligase low > 88
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_09155 amino acid dehydrogenase 0.28 AO353_21070 long-chain fatty acid--CoA ligase low > 101
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.28 Pf1N1B4_5982 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 87
Variovorax sp. SCN45 0.16 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.53 GFF1335 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type low > 127
Pseudomonas stutzeri RCH2 0.16 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.43 Psest_2444 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.28 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.28 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Dechlorosoma suillum PS 0.14 Dsui_0501 glycine/D-amino acid oxidase, deaminating 0.28 Dsui_0319 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II — —
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1644 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.51 Ac3H11_2529 3-methylmercaptopropionyl-CoA ligase (DmdB) low > 79
Marinobacter adhaerens HP15 0.12 HP15_2610 D-amino acid dehydrogenase small subunit 0.29 HP15_2595 acyl-CoA synthetase low > 73
Sphingomonas koreensis DSMZ 15582 0.11 Ga0059261_3351 Glycine/D-amino acid oxidases (deaminating) 0.48 Ga0059261_0337 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 68

Not shown: 44 genomes with orthologs for TX73_019540 only; 2 genomes with orthologs for TX73_023060 only