Conservation of cofitness between TX73_019540 and TX73_002980 in Rhodopseudomonas palustris CGA009

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_002980 polyhydroxyalkanoate depolymerase 0.52 14
Rhizobium sp. OAE497 0.54 ABIE40_RS03380 FAD-binding oxidoreductase 0.61 ABIE40_RS19315 polyhydroxyalkanoate depolymerase low > 107
Sinorhizobium meliloti 1021 0.53 SMc00797 oxidoreductase 0.63 SMc02770 hypothetical protein low > 103
Ralstonia solanacearum PSI07 0.53 RPSI07_RS07505 FAD-binding oxidoreductase 0.41 RPSI07_RS19250 polyhydroxyalkanoate depolymerase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03160 D-amino-acid dehydrogenase 0.41 H281DRAFT_00296 poly(3-hydroxybutyrate) depolymerase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS16195 FAD-binding oxidoreductase 0.41 RALBFv3_RS14215 polyhydroxyalkanoate depolymerase 0.44 11
Ralstonia solanacearum UW163 0.52 UW163_RS16930 FAD-binding oxidoreductase 0.41 UW163_RS11680 polyhydroxyalkanoate depolymerase — —
Paraburkholderia graminis OAS925 0.52 ABIE53_004136 D-amino-acid dehydrogenase 0.40 ABIE53_001426 poly(3-hydroxybutyrate) depolymerase low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS10270 D-amino acid dehydrogenase 0.41 BPHYT_RS06095 esterase low > 109
Bosea sp. OAE506 0.51 ABIE41_RS13575 FAD-binding oxidoreductase 0.66 ABIE41_RS03885 polyhydroxyalkanoate depolymerase low > 77
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS12475 FAD-binding oxidoreductase 0.43 QEN71_RS24545 polyhydroxyalkanoate depolymerase low > 153
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS23145 FAD-binding oxidoreductase 0.42 ABZR87_RS09930 polyhydroxyalkanoate depolymerase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF267 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.41 GFF4779 Intracellular PHB depolymerase (EC 3.1.1.-) low > 90
Ralstonia solanacearum GMI1000 0.23 RS_RS02525 FAD-dependent oxidoreductase 0.42 RS_RS04990 polyhydroxyalkanoate depolymerase low > 80
Castellaniella sp019104865 MT123 0.21 ABCV34_RS10190 FAD-dependent oxidoreductase 0.43 ABCV34_RS08455 polyhydroxyalkanoate depolymerase low > 48
Agrobacterium fabrum C58 0.20 Atu3364 D-amino acid dehydrogenase 0.59 Atu0015 intracellular PHB depolymerase low > 89
Rhodospirillum rubrum S1H 0.19 Rru_A2064 FAD dependent oxidoreductase (NCBI) 0.48 Rru_A3356 Polyhydroxyalkanoate depolymerase (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS22955 D-amino acid dehydrogenase 0.45 HSERO_RS08080 poly[D(-)-3-hydroxyalkanoate] depolymerase low > 78
Azospirillum sp. SherDot2 0.18 MPMX19_04536 D-amino acid dehydrogenase 1 0.53 MPMX19_05700 hypothetical protein low > 112
Phaeobacter inhibens DSM 17395 0.18 PGA1_c05140 D-amino acid dehydrogenase small subunit 0.32 PGA1_c20940 PHA depolymerase PhaZ low > 62
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS09075 amino acid dehydrogenase 0.42 RR42_RS05985 esterase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.1916.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.44 Xcc-8004.3576.1 Intracellular PHB depolymerase (EC 3.1.1.-) low > 74
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_06665 dadA D-amino acid dehydrogenase small subunit 0.39 OKGIIK_11535 phaZ polyhydroxyalkanoate depolymerase 0.53 18
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.40 ABID97_RS13985 polyhydroxyalkanoate depolymerase low > 91
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS00590 D-amino acid dehydrogenase 0.40 LRK54_RS04750 polyhydroxyalkanoate depolymerase low > 59
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS08770 D-amino acid dehydrogenase 0.51 A4249_RS15060 polyhydroxyalkanoate depolymerase low > 48
Rhodanobacter denitrificans MT42 0.16 LRK55_RS00360 D-amino acid dehydrogenase 0.40 LRK55_RS04530 polyhydroxyalkanoate depolymerase low > 63
Variovorax sp. SCN45 0.16 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.40 GFF943 Intracellular PHB depolymerase low > 127
Dinoroseobacter shibae DFL-12 0.14 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.31 Dshi_2234 polyhydroxyalkanoate depolymerase, intracellular (RefSeq) low > 64
Dechlorosoma suillum PS 0.14 Dsui_0501 glycine/D-amino acid oxidase, deaminating 0.46 Dsui_2489 polyhydroxyalkanoate depolymerase, intracellular — —
Azospirillum brasilense Sp245 0.14 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.52 AZOBR_RS02470 esterase low > 97
Magnetospirillum magneticum AMB-1 0.13 AMB_RS14080 D-amino-acid dehydrogenase 0.47 AMB_RS02670 polyhydroxyalkanoate depolymerase — —
Marinobacter adhaerens HP15 0.12 HP15_2610 D-amino acid dehydrogenase small subunit 0.47 HP15_2783 polyhydroxyalkanoate depolymerase, intracellular low > 73
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS08930 FAD-dependent oxidoreductase 0.40 ABZR86_RS19210 polyhydroxyalkanoate depolymerase — —
Sphingomonas koreensis DSMZ 15582 0.11 Ga0059261_3351 Glycine/D-amino acid oxidases (deaminating) 0.46 Ga0059261_3277 polyhydroxyalkanoate depolymerase, intracellular low > 68

Not shown: 46 genomes with orthologs for TX73_019540 only; 3 genomes with orthologs for TX73_002980 only