Conservation of cofitness between SMc00019 and SMc04024 in Sinorhizobium meliloti 1021

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00019 hypothetical protein 1.0 SMc04024 membrane-bound lytic murein transglycosylase 0.38 14
Agrobacterium fabrum C58 0.75 Atu0781 hypothetical protein 0.70 Atu3779 lytic murein transglycosylase low > 89
Rhizobium sp. OAE497 0.74 ABIE40_RS04185 YqgE/AlgH family protein 0.75 ABIE40_RS16255 lytic murein transglycosylase low > 107
Bosea sp. OAE506 0.56 ABIE41_RS23005 YqgE/AlgH family protein 0.34 ABIE41_RS08580 lytic murein transglycosylase low > 77
Rhodopseudomonas palustris CGA009 0.55 TX73_004710 YqgE/AlgH family protein 0.35 TX73_004630 lytic murein transglycosylase low > 86
Azospirillum brasilense Sp245 0.50 AZOBR_RS10525 hypothetical protein 0.33 AZOBR_RS06045 murein transglycosylase low > 97
Azospirillum sp. SherDot2 0.50 MPMX19_01077 hypothetical protein 0.34 MPMX19_01429 Tn3 family transposase TnXax1 low > 112
Dinoroseobacter shibae DFL-12 0.45 Dshi_3083 protein of unknown function DUF179 (RefSeq) 0.35 Dshi_0016 lytic murein transglycosylase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.40 PGA1_c03130 Putative transcriptional regulator 0.34 PGA1_c36460 putative lytic murein transglycosylase low > 62
Pseudomonas putida KT2440 0.39 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.37 PP_4798 putative Membrane-bound lytic murein transglycosylase low > 96
Pseudomonas stutzeri RCH2 0.38 Psest_0294 Putative transcriptional regulator 0.36 Psest_0521 lytic murein transglycosylase low > 67
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_03506 putative transcriptional regulator 0.26 CCNA_03431 membrane-bound lytic murein transglycosylase B low > 67
Caulobacter crescentus NA1000 0.38 CCNA_03506 putative transcriptional regulator 0.26 CCNA_03431 membrane-bound lytic murein transglycosylase B low > 66
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1019 UPF0301 protein YqgE 0.34 PfGW456L13_1369 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Ralstonia solanacearum GMI1000 0.38 RS_RS03395 YqgE/AlgH family protein 0.31 RS_RS23125 lytic murein transglycosylase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_3981 UPF0301 protein YqgE 0.30 Ac3H11_2455 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Ralstonia solanacearum PSI07 0.37 RPSI07_RS20650 YqgE/AlgH family protein 0.31 RPSI07_RS05710 lytic murein transglycosylase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF648 UPF0301 protein YqgE 0.30 GFF3762 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 90
Pseudomonas sp. S08-1 0.37 OH686_10925 UPF0301 protein YqgE 0.34 OH686_09270 Membrane-bound lytic murein transglycosylase B low > 80
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS12610 DUF179 domain-containing protein 0.29 RALBFv3_RS18395 lytic murein transglycosylase low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS00955 DUF179 domain-containing protein 0.29 UW163_RS20735 lytic murein transglycosylase — —
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2350 UPF0301 protein YqgE 0.34 Pf1N1B4_2701 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_13465 hypothetical protein 0.34 AO356_15355 murein transglycosylase low > 104
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0485 Protein of unknown function DUF179 0.36 Psyr_4357 HopAJ2 protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4609 UPF0301 protein YqgE 0.35 Pf6N2E2_5007 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0485 Protein of unknown function DUF179 0.36 Psyr_4357 HopAJ2 protein low > 86
Pseudomonas simiae WCS417 0.36 PS417_26685 hypothetical protein 0.33 PS417_24680 murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_08120 hypothetical protein 0.36 AO353_06430 murein transglycosylase low > 101
Marinobacter adhaerens HP15 0.36 HP15_3510 transcriptional regulator 0.29 HP15_3357 peptidoglycan binding domain protein — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS28330 YqgE/AlgH family protein 0.32 PFLU_RS26610 lytic murein transglycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS28330 YqgE/AlgH family protein 0.32 PFLU_RS26610 lytic murein transglycosylase low > 109
Pseudomonas sp. RS175 0.36 PFR28_04234 hypothetical protein 0.34 PFR28_03859 Tn3 family transposase TnXax1 low > 88
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS10380 YqgE/AlgH family protein 0.29 ABZR86_RS15285 lytic murein transglycosylase — —
Shewanella amazonensis SB2B 0.35 Sama_2472 putative transcriptional regulator (RefSeq) 0.29 Sama_2029 membrane-bound lytic transglycolase-related protein (RefSeq) low > 62
Variovorax sp. OAS795 0.35 ABID97_RS24675 YqgE/AlgH family protein 0.33 ABID97_RS06750 lytic murein transglycosylase low > 91
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS00260 YqgE/AlgH family protein 0.25 A4249_RS09135 lytic murein transglycosylase low > 48
Alteromonas macleodii MIT1002 0.34 MIT1002_03056 hypothetical protein 0.27 MIT1002_00408 Membrane-bound lytic murein transglycosylase B precursor low > 70
Shewanella loihica PV-4 0.33 Shew_1144 hypothetical protein (RefSeq) 0.29 Shew_2141 lytic murein transglycosylase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.33 SO3346 conserved hypothetical protein (NCBI ptt file) 0.28 SO1994 membrane-bound lytic transglycolase-related protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1200 hypothetical protein (RefSeq) 0.28 Shewana3_2459 lytic murein transglycosylase (RefSeq) low > 73
Dickeya dianthicola 67-19 0.32 HGI48_RS18500 YqgE/AlgH family protein 0.32 HGI48_RS11670 lytic murein transglycosylase low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS19635 YqgE/AlgH family protein 0.31 DZA65_RS12155 lytic murein transglycosylase low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS18565 YqgE/AlgH family protein 0.32 DDA3937_RS11610 lytic murein transglycosylase low > 74
Acinetobacter radioresistens SK82 0.31 MPMX26_00238 hypothetical protein 0.31 MPMX26_03049 Tn3 family transposase TnXax1 low > 36

Not shown: 50 genomes with orthologs for SMc00019 only; 0 genomes with orthologs for SMc04024 only