| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Sinorhizobium meliloti 1021 | 1.0 | SM_b20039 | | transcriptional regulator | 1.0 | SM_b21633 | | enoyl-CoA hydratase | 0.25 | 9 |
| Pseudomonas sp. BP01 | 0.64 | JOY50_RS04420 | | PLP-dependent aminotransferase family protein | 0.62 | JOY50_RS11950 | paaG | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 84 |
| Pseudomonas putida KT2440 | 0.63 | PP_2948 | | Transcriptional regulator, GntR family | 0.61 | PP_3283 | | 1,2-epoxyphenylacetyl-CoA isomerase | low | > 96 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.62 | H281DRAFT_05339 | | transcriptional regulator, GntR family | 0.47 | H281DRAFT_05722 | | 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) (from data) | low | > 103 |
| Acinetobacter baumannii LAC-4 | 0.61 | RR41_RS07935 | | PLP-dependent aminotransferase family protein | 0.58 | RR41_RS10880 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 55 |
| Paraburkholderia graminis OAS925 | 0.60 | ABIE53_006487 | | DNA-binding transcriptional MocR family regulator | 0.47 | ABIE53_003632 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | low | > 113 |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS27565 | | GntR family transcriptional regulator | 0.32 | AZOBR_RS29210 | | enoyl-CoA hydratase | low | > 97 |
| Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS15105 | | PLP-dependent aminotransferase family protein | 0.49 | ABCV34_RS13715 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 48 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_02820 | | HTH-type transcriptional regulator NorG | 0.62 | MPMX19_05776 | | 1,2-epoxyphenylacetyl-CoA isomerase | low | > 112 |
| Xanthobacter sp. DMC5 | 0.55 | GFF396 | | HTH-type transcriptional regulator NorG | 0.62 | GFF1383 | | 1,2-epoxyphenylacetyl-CoA isomerase | — | — |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02978 | | Histidinol-phosphate aminotransferase | 0.57 | MPMX26_01555 | | 1,2-epoxyphenylacetyl-CoA isomerase | — | — |
| Pseudomonas sp. SVBP6 | 0.38 | COO64_RS06555 | | PLP-dependent aminotransferase family protein | 0.60 | COO64_RS25530 | paaG | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 93 |
| Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_4930 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.63 | PfGW456L13_2433 | | Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17) | low | > 87 |
| Dechlorosoma suillum PS | 0.36 | Dsui_0420 | | transcriptional regulator with HTH domain and aminotransferase domain | 0.34 | Dsui_0502 | | enoyl-CoA hydratase/carnithine racemase | low | > 51 |
| Pseudomonas aeruginosa PA14 | 0.36 | IKLFDK_27035 | | GntR family transcriptional regulator | 0.30 | IKLFDK_28640 | | enoyl-CoA hydratase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.36 | DQ20_RS49825 | | PLP-dependent aminotransferase family protein | 0.30 | DQ20_RS51365 | | enoyl-CoA hydratase-related protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.36 | DY961_RS12300 | | PLP-dependent aminotransferase family protein | 0.31 | DY961_RS10695 | | enoyl-CoA hydratase-related protein | low | > 100 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_4178 | | Transcriptional regulator GabR of GABA utilization (GntR family with aminotransferase-like domain) | 0.31 | Ac3H11_2719 | | Enoyl-CoA hydratase (EC 4.2.1.17) | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS02890 | | PLP-dependent aminotransferase family protein | 0.49 | QEN71_RS27510 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS01590 | | GntR family transcriptional regulator | 0.47 | RR42_RS18255 | | enoyl-CoA hydratase | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS15820 | | GntR family transcriptional regulator | 0.49 | BPHYT_RS17350 | | enoyl-CoA hydratase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS09025 | | GntR family transcriptional regulator | 0.56 | HSERO_RS20640 | | enoyl-CoA hydratase | low | > 78 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS21590 | | PLP-dependent aminotransferase family protein | 0.42 | ABID97_RS22770 | | enoyl-CoA hydratase-related protein | low | > 91 |
| Pseudomonas fluorescens FW300-N2E2 | 0.34 | Pf6N2E2_684 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.26 | Pf6N2E2_1934 | | Enoyl-CoA hydratase (EC 4.2.1.17) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_24975 | | GntR family transcriptional regulator | 0.26 | AO356_30355 | | enoyl-CoA hydratase | low | > 104 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS15695 | | PLP-dependent aminotransferase family protein | 0.46 | UW163_RS07180 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS14115 | | PLP-dependent aminotransferase family protein | 0.46 | RALBFv3_RS06445 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS09835 | | PLP-dependent aminotransferase family protein | 0.46 | ABZR87_RS02100 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 80 |
| Pseudomonas simiae WCS417 | 0.34 | PS417_15990 | | GntR family transcriptional regulator | 0.29 | PS417_10680 | | enoyl-CoA hydratase | low | > 88 |
| Ralstonia solanacearum GMI1000 | 0.33 | RS_RS04895 | | PLP-dependent aminotransferase family protein | 0.46 | RS_RS14390 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | — | — |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS19345 | | PLP-dependent aminotransferase family protein | 0.45 | RPSI07_RS10795 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | low | > 81 |
| Variovorax sp. SCN45 | 0.33 | GFF6644 | | DNA-binding transcriptional regulator, MocR family / aminotransferase domain | 0.42 | GFF7362 | | Enoyl-CoA hydratase (EC 4.2.1.17) | low | > 127 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_01655 | | GntR family transcriptional regulator | 0.31 | AO353_24830 | | enoyl-CoA hydratase | low | > 101 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF5390 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.38 | GFF620 | | Enoyl-CoA hydratase (EC 4.2.1.17) | — | — |
| Pseudomonas segetis P6 | 0.20 | ACVTMO_RS10600 | | aminotransferase-like domain-containing protein | 0.62 | ACVTMO_RS09950 | paaG | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 75 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_17705 | ydcR | Uncharacterized HTH-type transcriptional regulator YdcR | 0.56 | BNILDI_17915 | paaG | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 75 |
| Escherichia coli BW25113 | 0.19 | b1439 | ydcR | fused predicted DNA-binding transcriptional regulator/predicted amino transferase (NCBI) | 0.55 | b1394 | paaG | enoyl-CoA hydratase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_19255 | ydcR | Uncharacterized HTH-type transcriptional regulator YdcR | 0.56 | NOLOHH_19460 | paaG | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 76 |
| Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_1522 | | Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs | 0.54 | EX28DRAFT_1414 | | phenylacetate degradation probable enoyl-CoA hydratase paaB | low | > 76 |
| Klebsiella michiganensis M5al | 0.19 | BWI76_RS12985 | | transcriptional regulator | 0.57 | BWI76_RS13120 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | — | — |
| Synechococcus elongatus PCC 7942 | 0.19 | Synpcc7942_1725 | | transcriptional regulator, GntR family | 0.19 | Synpcc7942_0597 | menB | naphthoate synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_02276 | | 2-aminoadipate transaminase | 0.55 | OHPLBJKB_02317 | | 1,2-epoxyphenylacetyl-CoA isomerase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.18 | MPMX20_02425 | | HTH-type transcriptional regulator NorG | 0.54 | MPMX20_02148 | | 1,2-epoxyphenylacetyl-CoA isomerase | low | > 85 |
| Klebsiella pneumoniae MKP103 | 0.18 | KDGMDA_23110 | | GntR family transcriptional regulator | 0.55 | KDGMDA_20730 | | 2-(1 2-epoxy-1 2-dihydrophenyl)acetyl-CoA isomerase PaaG | low | > 95 |
| Marinobacter adhaerens HP15 | 0.18 | HP15_1687 | | transcriptional regulator, GntR family with aminotransferase domain protein | 0.61 | HP15_2692 | | phenylacetate degradation probable enoyl-CoA hydratase paaB | low | > 73 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_00175 | | PLP-dependent aminotransferase family protein | 0.52 | IAI46_16380 | | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase | low | > 87 |
Not shown: 37 genomes with orthologs for SM_b20039 only; 13 genomes with orthologs for SM_b21633 only