Conservation of cofitness between SMc01139 and SM_b20986 in Sinorhizobium meliloti 1021

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc01139 RNA polymerase factor sigma-54 1.0 SM_b20986 Nitrate reductase (EC 1.7.99.4) (from data) 0.42 9
Rhizobium sp. OAE497 0.69 ABIE40_RS01860 RNA polymerase factor sigma-54 0.75 ABIE40_RS25570 nitrate reductase low > 107
Agrobacterium fabrum C58 0.64 Atu0332 RNA polymerase sigma-54 factor 0.77 Atu3900 nitrate reductase large subunit low > 89
Bosea sp. OAE506 0.50 ABIE41_RS00125 RNA polymerase factor sigma-54 0.48 ABIE41_RS21320 molybdopterin-dependent oxidoreductase low > 77
Magnetospirillum magneticum AMB-1 0.47 AMB_RS19925 RNA polymerase sigma-54 factor 0.50 AMB_RS02735 nitrate reductase — —
Azospirillum sp. SherDot2 0.46 MPMX19_02668 RNA polymerase sigma-54 factor 2 0.48 MPMX19_05928 Nitrate reductase low > 112
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_03713 RNA polymerase sigma-54 factor rpoN 0.45 CCNA_00653 assimilatory nitrate reductase catalytic subunit low > 67
Caulobacter crescentus NA1000 0.44 CCNA_03713 RNA polymerase sigma-54 factor rpoN 0.45 CCNA_00653 Nitrate reductase (EC 1.7.99.4) (from data) low > 66
Pseudomonas stutzeri RCH2 0.29 Psest_3313 RNA polymerase sigma-54 factor 0.36 Psest_1926 Uncharacterized anaerobic dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS07060 RNA polymerase factor sigma-54 0.50 ABZR87_RS18885 nitrate reductase 0.41 42
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS02085 RNA polymerase subunit sigma-54 0.51 RR42_RS31800 Nitrate reductase (EC 1.7.99.4) (from data) low > 128
Dickeya dianthicola ME23 0.28 DZA65_RS01510 RNA polymerase factor sigma-54 0.50 DZA65_RS14745 nitrate reductase low > 75
Dickeya dianthicola 67-19 0.28 HGI48_RS01445 RNA polymerase factor sigma-54 0.50 HGI48_RS14085 nitrate reductase low > 71
Ralstonia solanacearum UW163 0.28 UW163_RS02410 RNA polymerase sigma-54 factor 0.49 UW163_RS21120 nitrate reductase — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS11170 RNA polymerase sigma-54 factor 0.49 RALBFv3_RS18010 nitrate reductase low > 76
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_05180 RNA polymerase sigma-54 factor 0.36 AO353_00815 Nitrate reductase (EC 1.7.99.4) (from data) — —
Klebsiella michiganensis M5al 0.28 BWI76_RS25265 RNA polymerase factor sigma-54 0.46 BWI76_RS17360 nitrate reductase — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_07035 RNA polymerase sigma-54 factor 0.36 AO356_02780 nitrate reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_01927 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.50 H281DRAFT_00665 assimilatory nitrate reductase (NADH) alpha subunit apoprotein (EC 1.7.1.1) 0.26 70
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22130 RNA polymerase factor sigma-54 0.49 RPSI07_RS05595 nitrate reductase low > 81
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.43 EX28DRAFT_0846 Anaerobic dehydrogenases, typically selenocysteine-containing — —
Paraburkholderia graminis OAS925 0.28 ABIE53_000718 RNA polymerase sigma-54 factor 0.50 ABIE53_001856 assimilatory nitrate reductase catalytic subunit low > 113
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.36 Psyr_2099 assimilatory nitrate reductase (NADH) alpha subunit apoprotein — —
Ralstonia solanacearum GMI1000 0.28 RS_RS02020 RNA polymerase sigma-54 factor 0.49 RS_RS23020 nitrate reductase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.36 Psyr_2099 assimilatory nitrate reductase (NADH) alpha subunit apoprotein — —
Dickeya dadantii 3937 0.28 DDA3937_RS01530 RNA polymerase factor sigma-54 0.50 DDA3937_RS14085 nitrate reductase low > 74
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1080 RNA polymerase sigma-54 factor RpoN 0.36 Pf1N1B4_3835 Nitrate reductase (EC 1.7.99.4) (from data) — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_5014 RNA polymerase sigma-54 factor RpoN 0.37 PfGW456L13_4103 Nitrate reductase (EC 1.7.99.4) (from data) — —
Pseudomonas sp. RS175 0.27 PFR28_00173 RNA polymerase sigma-54 factor 0.36 PFR28_01047 Nitrate reductase — —
Pseudomonas sp. S08-1 0.27 OH686_08540 RNA polymerase sigma-54 factor 0.33 OH686_00500 Assimilatory nitrate reductase large subunit — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3267 RNA polymerase sigma-54 factor RpoN 0.36 Pf6N2E2_2380 Nitrate reductase (EC 1.7.99.4) (from data) — —
Enterobacter sp. TBS_079 0.27 MPMX20_04108 RNA polymerase sigma-54 factor 0.44 MPMX20_02620 Nitrate reductase — —
Pantoea sp. MT58 0.27 IAI47_17185 RNA polymerase factor sigma-54 0.44 IAI47_11165 nitrate reductase low > 76
Pectobacterium carotovorum WPP14 0.27 HER17_RS20060 RNA polymerase factor sigma-54 0.50 HER17_RS07335 nitrate reductase low > 75
Acidovorax sp. GW101-3H11 0.27 Ac3H11_727 RNA polymerase sigma-54 factor RpoN 0.35 Ac3H11_3239 Assimilatory nitrate reductase large subunit (EC:1.7.99.4) low > 79
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS19855 RNA polymerase subunit sigma-54 0.51 HSERO_RS14550 nitrate reductase — —
Rahnella sp. WP5 0.27 EX31_RS12400 RNA polymerase factor sigma-54 0.51 EX31_RS09105 nitrate reductase low > 89
Variovorax sp. OAS795 0.25 ABID97_RS04780 RNA polymerase factor sigma-54 0.35 ABID97_RS20605 molybdopterin-dependent oxidoreductase — —
Variovorax sp. SCN45 0.25 GFF6290 RNA polymerase sigma-54 factor RpoN 0.35 GFF4731 Assimilatory nitrate reductase large subunit (EC 1.7.99.4) low > 127
Acinetobacter radioresistens SK82 0.25 MPMX26_02592 RNA polymerase sigma-54 factor 0.46 MPMX26_01572 Nitrate reductase — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS19815 RNA polymerase factor sigma-54 0.50 ABZR86_RS03865 Nitrate reductase (EC 1.7.99.4) (from data) low > 74
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1662.1 RNA polymerase sigma-54 factor RpoN 0.35 Xcc-8004.2710.1 Assimilatory nitrate reductase large subunit (EC:1.7.99.4) low > 74

Not shown: 54 genomes with orthologs for SMc01139 only; 1 genomes with orthologs for SM_b20986 only