Conservation of cofitness between RR42_RS06555 and RR42_RS26915 in Cupriavidus basilensis FW507-4G11

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 1.0 RR42_RS26915 AMP-binding protein 0.64 3
Ralstonia solanacearum GMI1000 0.90 RS_RS07905 CoA transferase subunit A 0.77 RS_RS02190 AMP-binding protein 0.29 29
Paraburkholderia sabiae LMG 24235 0.86 QEN71_RS05245 CoA transferase subunit A 0.77 QEN71_RS29275 AMP-binding protein low > 153
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS01830 CoA transferase subunit A 0.76 RALBFv3_RS11360 AMP-binding protein low > 76
Ralstonia solanacearum UW163 0.86 UW163_RS15140 CoA transferase subunit A 0.76 UW163_RS02225 AMP-binding protein
Ralstonia solanacearum PSI07 0.85 RPSI07_RS15660 CoA transferase subunit A 0.77 RPSI07_RS21845 AMP-binding protein low > 81
Burkholderia phytofirmans PsJN 0.84 BPHYT_RS13675 succinyl-CoA:3-ketoacid-CoA transferase 0.76 BPHYT_RS19375 AMP-binding protein low > 109
Acinetobacter radioresistens SK82 0.81 MPMX26_00627 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.52 MPMX26_00634 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04495 3-oxoacid CoA-transferase subunit A 0.76 H281DRAFT_02398 fatty-acyl-CoA synthase low > 103
Paraburkholderia graminis OAS925 0.80 ABIE53_002909 3-oxoacid CoA-transferase subunit A 0.76 ABIE53_000249 fatty-acyl-CoA synthase low > 113
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS13770 CoA transferase subunit A 0.77 ABZR87_RS07325 AMP-binding protein low > 80
Acidovorax sp. GW101-3H11 0.79 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.61 Ac3H11_3009 Acetoacetate--CoA ligase (EC 6.2.1.16) (from data) low > 79
Variovorax sp. OAS795 0.78 ABID97_RS19440 CoA transferase subunit A 0.57 ABID97_RS25135 AMP-binding protein low > 91
Pseudomonas stutzeri RCH2 0.78 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) 0.55 Psest_1086 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 67
Variovorax sp. SCN45 0.76 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.59 GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF5197 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.62 GFF4967 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 90
Rhodopseudomonas palustris CGA009 0.73 TX73_021545 CoA transferase subunit A 0.26 TX73_002405 AMP-binding protein low > 86
Dinoroseobacter shibae DFL-12 0.68 Dshi_1136 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.61 Dshi_3403 AMP-dependent synthetase and ligase (RefSeq) low > 64
Shewanella loihica PV-4 0.66 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.57 Shew_2593 acyl-CoA synthetase (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_04625 succinyl-CoA--3-ketoacid-CoA transferase 0.52 CA264_07945 AMP-binding protein low > 74
Shewanella oneidensis MR-1 0.64 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 0.56 SO1971 AMP-binding family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.64 Sama_0518 3-oxoacid CoA-transferase (RefSeq) 0.57 Sama_1904 AMP-binding domain protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.63 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.56 Shewana3_2475 AMP-binding domain protein (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_0265 3-oxoacid CoA-transferase, A subunit 0.54 Ga0059261_0771 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 68
Alteromonas macleodii MIT1002 0.62 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.52 MIT1002_03360 Long-chain-fatty-acid--CoA ligase low > 70
Mycobacterium tuberculosis H37Rv 0.61 Rv2504c Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA (3-oxo acid:CoA transferase) (OXCT A) (succinyl-CoA:3-oxoacid-coenzyme A transferase) 0.46 Rv2505c Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) low > 58
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.53 Pf1N1B4_3988 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Pseudomonas putida KT2440 0.60 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.55 PP_3458 Butyrate--CoA ligase low > 96
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase 0.53 AO353_20355 AMP-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase 0.53 AO356_01575 AMP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.54 Pf6N2E2_2190 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 103
Pseudomonas sp. RS175 0.60 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.53 PFR28_01261 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase low > 88
Pseudomonas simiae WCS417 0.59 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase 0.51 PS417_17010 AMP-binding protein
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS10585 CoA transferase subunit A 0.52 PFLU_RS18960 AMP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS10585 CoA transferase subunit A 0.52 PFLU_RS18960 AMP-binding protein low > 109
Azospirillum sp. SherDot2 0.38 MPMX19_03462 Acetate CoA-transferase subunit alpha 0.64 MPMX19_03344 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase low > 112

Not shown: 27 genomes with orthologs for RR42_RS06555 only; 16 genomes with orthologs for RR42_RS26915 only