| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS34650 | | LacI family transcriptional regulator | 1.0 | RR42_RS18825 | | ubiquinol-cytochrome C reductase | 0.47 | 3 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS03270 | | LacI family DNA-binding transcriptional regulator | 0.57 | ABID97_RS22985 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.53 | 7 |
| Variovorax sp. SCN45 | 0.44 | GFF3450 | | Transcriptional regulator, LacI family | 0.59 | GFF6694 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 127 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS01690 | | LacI family DNA-binding transcriptional regulator | 0.42 | ABZR86_RS09880 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 74 |
| Sinorhizobium meliloti 1021 | 0.24 | SM_b20014 | | transcriptional regulator | 0.27 | SMc00187 | | ubiquinol-cytochrome C reductase iron-sulfur subunit protein | low | > 103 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS06440 | | LacI family DNA-binding transcriptional regulator | 0.31 | ABIE41_RS11190 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 77 |
| Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_14670 | | transcriptional repressor PurR | 0.50 | CSW01_03045 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS09955 | | LacI family DNA-binding transcriptional regulator | 0.79 | ABZR87_RS02385 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_20830 | | LacI family transcriptional regulator | 0.39 | AO353_15245 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS19225 | | LacI family transcriptional regulator | 0.81 | RPSI07_RS10505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS05020 | | LacI family transcriptional regulator | 0.81 | RS_RS14675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_03227 | | transcriptional regulator, LacI family | 0.67 | H281DRAFT_05669 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhizobium sp. OAE497 | 0.22 | ABIE40_RS16645 | | LacI family DNA-binding transcriptional regulator | 0.31 | ABIE40_RS13130 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 107 |
| Ralstonia solanacearum UW163 | 0.22 | UW163_RS11705 | | LacI family transcriptional regulator | 0.81 | UW163_RS06885 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.22 | RALBFv3_RS14240 | | LacI family transcriptional regulator | 0.81 | RALBFv3_RS06730 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_2238 | | transcriptional regulator, LacI family (RefSeq) | 0.22 | Dshi_3278 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS08670 | | LacI family transcriptional regulator | 0.45 | LRK54_RS13765 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.22 | LRK55_RS08435 | | LacI family DNA-binding transcriptional regulator | 0.44 | LRK55_RS13480 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.22 | HSERO_RS11495 | | LacI family transcription regulator | 0.61 | HSERO_RS20245 | | ubiquinol-cytochrome C reductase | — | — |
| Lysobacter sp. OAE881 | 0.22 | ABIE51_RS08800 | | LacI family DNA-binding transcriptional regulator | 0.41 | ABIE51_RS15440 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.58 | 49 |
| Paraburkholderia graminis OAS925 | 0.22 | ABIE53_004064 | | DNA-binding LacI/PurR family transcriptional regulator | 0.68 | ABIE53_003685 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 113 |
| Pseudomonas fluorescens FW300-N1B4 | 0.22 | Pf1N1B4_6032 | | Ribose operon repressor | 0.41 | Pf1N1B4_962 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 87 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.22 | GFF4377 | | Galactose operon repressor, GalR-LacI family of transcriptional regulators | 0.52 | GFF1295 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS38555 | | substrate-binding domain-containing protein | 0.67 | QEN71_RS27785 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 153 |
| Sphingomonas koreensis DSMZ 15582 | 0.21 | Ga0059261_2309 | | transcriptional regulator, LacI family | 0.27 | Ga0059261_3219 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | low | > 68 |
| Pseudomonas sp. RS175 | 0.21 | PFR28_02734 | | Ribose operon repressor | 0.41 | PFR28_03606 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_164 | | Ribose operon repressor | 0.41 | Pf6N2E2_5337 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 103 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.21 | Xcc-8004.5254.1 | | Transcriptional regulator, LacI family | 0.41 | Xcc-8004.2228.1 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 74 |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS15195 | | LacI family transcriptional regulator | 0.42 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS15195 | | LacI family transcriptional regulator | 0.42 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 109 |
| Azospirillum sp. SherDot2 | 0.21 | MPMX19_05875 | | Catabolite control protein A | 0.29 | MPMX19_05012 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Pseudomonas simiae WCS417 | 0.20 | PS417_13650 | | LacI family transcriptional regulator | 0.42 | PS417_04155 | | ubiquinol-cytochrome C reductase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.20 | OKGIIK_15435 | | LacI family transcriptional regulator | 0.43 | OKGIIK_03005 | petA | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Shewanella loihica PV-4 | 0.17 | Shew_1111 | | LacI family transcription regulator (RefSeq) | 0.40 | Shew_0570 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | low | > 60 |
| Pseudomonas stutzeri RCH2 | 0.15 | Psest_3356 | | D-fructose-responsive transcription factor | 0.41 | Psest_3279 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
Not shown: 35 genomes with orthologs for RR42_RS34650 only; 21 genomes with orthologs for RR42_RS18825 only