Conservation of cofitness between RR42_RS09065 and RR42_RS15885 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS09065 multidrug DMT transporter permease 1.0 RR42_RS15885 deoxyribodipyrimidine photolyase 0.49 5
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS11175 multidrug DMT transporter permease 0.63 HSERO_RS09280 deoxyribodipyrimidine photo-lyase low > 78
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS26380 DMT family transporter 0.26 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS26380 DMT family transporter 0.26 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Pseudomonas simiae WCS417 0.31 PS417_24455 membrane protein 0.25 PS417_03665 deoxyribodipyrimidine photolyase low > 88
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3249 Arginine/ornithine antiporter ArcD 0.25 Pf1N1B4_2927 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 87
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_2128 Protein of unknown function DUF6 0.27 Psyr_0961 deoxyribodipyrimidine photo-lyase type I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_2128 Protein of unknown function DUF6 0.27 Psyr_0961 deoxyribodipyrimidine photo-lyase type I low > 86
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_1422 membrane protein, putative 0.24 PfGW456L13_1589 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5055 membrane protein, putative 0.26 Pf6N2E2_5228 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_15570 hypothetical protein 0.26 AO356_16530 deoxyribodipyrimidine photolyase low > 104
Dechlorosoma suillum PS 0.29 Dsui_2899 putative permease, DMT superfamily 0.49 Dsui_0591 deoxyribodipyrimidine photolyase low > 51
Pseudomonas sp. RS175 0.29 PFR28_03816 Riboflavin transporter 0.26 PFR28_03648 Deoxyribodipyrimidine photo-lyase low > 88
Pseudomonas putida KT2440 0.29 PP_3670 putative permease of the drug/metabolite transporter superfamily 0.25 PP_0739 deoxyribodipyrimidine photolyase low > 96
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_06205 hypothetical protein 0.26 AO353_14820 deoxyribodipyrimidine photolyase low > 101
Azospirillum brasilense Sp245 0.27 AZOBR_RS29865 DMT transporter permease 0.27 AZOBR_RS09290 deoxyribodipyrimidine photo-lyase low > 97
Bosea sp. OAE506 0.27 ABIE41_RS08450 DMT family transporter 0.23 ABIE41_RS15630 deoxyribodipyrimidine photo-lyase low > 77
Rhodopseudomonas palustris CGA009 0.26 TX73_011095 DMT family transporter 0.28 TX73_016440 deoxyribodipyrimidine photo-lyase low > 86
Azospirillum sp. SherDot2 0.25 MPMX19_05794 Riboflavin transporter 0.26 MPMX19_01584 Deoxyribodipyrimidine photo-lyase low > 112
Pseudomonas stutzeri RCH2 0.25 Psest_0550 Predicted permease, DMT superfamily 0.26 Psest_2397 Deoxyribodipyrimidine photolyase low > 67
Variovorax sp. OAS795 0.24 ABID97_RS22600 DMT family transporter 0.57 ABID97_RS24680 deoxyribodipyrimidine photo-lyase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF113 Membrane protein, putative 0.57 GFF647 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 90
Variovorax sp. SCN45 0.23 GFF5790 putative membrane protein 0.55 GFF2156 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 127
Pseudomonas sp. S08-1 0.21 OH686_07740 membrane protein, putative 0.24 OH686_07850 Deoxyribodipyrimidine photolyase low > 80
Ralstonia solanacearum UW163 0.21 UW163_RS23345 EamA/RhaT family transporter 0.69 UW163_RS00965 deoxyribodipyrimidine photo-lyase — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS22750 EamA/RhaT family transporter 0.69 RALBFv3_RS12600 deoxyribodipyrimidine photo-lyase low > 76
Rhodospirillum rubrum S1H 0.21 Rru_A2777 Protein of unknown function DUF6, transmembrane (NCBI) 0.25 Rru_A2903 Deoxyribodipyrimidine photolyase (NCBI) low > 58
Agrobacterium fabrum C58 0.20 Atu4011 hypothetical protein 0.28 Atu1218 DNA photolyase low > 89
Acidovorax sp. GW101-3H11 0.19 Ac3H11_777 Permeases of the drug/metabolite transporter (DMT) superfamily 0.54 Ac3H11_3983 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 79
Phaeobacter inhibens DSM 17395 0.18 PGA1_c28950 putative integral membrane protein 0.20 PGA1_c13910 deoxyribodipyrimidine photo-lyase PhrB low > 62
Rhizobium sp. OAE497 0.18 ABIE40_RS08250 DMT family transporter 0.29 ABIE40_RS08320 deoxyribodipyrimidine photo-lyase low > 107
Dinoroseobacter shibae DFL-12 0.17 Dshi_0151 protein of unknown function DUF6 transmembrane (RefSeq) 0.20 Dshi_2318 Deoxyribodipyrimidine photo-lyase (RefSeq) low > 64
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS39460 DMT family transporter 0.61 QEN71_RS17830 deoxyribodipyrimidine photo-lyase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_03721 Threonine/homoserine efflux transporter RhtA 0.62 H281DRAFT_06033 deoxyribodipyrimidine photo-lyase type I low > 103
Shewanella sp. ANA-3 0.14 Shewana3_3884 hypothetical protein (RefSeq) 0.25 Shewana3_1166 deoxyribodipyrimidine photo-lyase type I (RefSeq) low > 73
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS26580 hypothetical protein 0.64 BPHYT_RS33665 deoxyribodipyrimidine photo-lyase — —
Shewanella oneidensis MR-1 0.13 SO0296 integral membrane domain protein (NCBI ptt file) 0.26 SO3384 phrB deoxyribodipyrimidine photolyase (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.13 OKGIIK_09140 EamA-like transporter family 0.25 OKGIIK_13930 Deoxyribodipyrimidine photolyase low > 52
Vibrio cholerae E7946 ATCC 55056 0.13 CSW01_19150 EamA family transporter 0.30 CSW01_14320 deoxyribodipyrimidine photo-lyase low > 62

Not shown: 5 genomes with orthologs for RR42_RS09065 only; 46 genomes with orthologs for RR42_RS15885 only