Conservation of cofitness between RR42_RS14640 and RR42_RS14645 in Cupriavidus basilensis FW507-4G11

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS14640 histidine ammonia-lyase 1.0 RR42_RS14645 urocanate hydratase 0.50 5
Pseudomonas sp. S08-1 0.87 OH686_16755 histidine ammonia-lyase 0.92 OH686_16745 urocanate hydratase low > 80
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4833 histidine ammonia-lyase 0.90 Psyr_4828 urocanate hydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4833 histidine ammonia-lyase 0.90 Psyr_4828 urocanate hydratase low > 86
Pseudomonas putida KT2440 0.84 PP_5032 Histidine ammonia-lyase 0.92 PP_5033 Urocanate hydratase 0.50 2
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_09600 histidine ammonia-lyase 0.92 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) 0.80 2
Pseudomonas simiae WCS417 0.84 PS417_01750 histidine ammonia-lyase 0.91 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) 0.53 2
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3799 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.92 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) 0.80 2
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01805 histidine ammonia-lyase 0.91 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01805 histidine ammonia-lyase 0.91 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_1581 Histidine ammonia-lyase (EC 4.3.1.3) 0.92 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) 0.34 9
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_12270 histidine ammonia-lyase 0.91 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) 0.59 2
Pseudomonas sp. RS175 0.84 PFR28_04971 Histidine ammonia-lyase 0.93 PFR28_04965 Urocanate hydratase low > 88
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_320 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.91 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) 0.91 1
Serratia liquefaciens MT49 0.82 IAI46_03660 histidine ammonia-lyase 0.91 IAI46_03665 urocanate hydratase low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2219 histidine ammonia-lyase (EC 4.3.1.3) 0.86 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_01400 Histidine ammonia-lyase 0.86 MPMX20_01399 Urocanate hydratase 0.56 1
Klebsiella michiganensis M5al 0.78 BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.86 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) 0.53 1
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06080 histidine ammonia-lyase 0.75 CSW01_06085 urocanate hydratase low > 62
Shewanella sp. ANA-3 0.66 Shewana3_0101 histidine ammonia-lyase (RefSeq) 0.73 Shewana3_0100 urocanate hydratase (RefSeq) 0.51 22
Shewanella oneidensis MR-1 0.66 SO0098 hutH histidine ammonia-lyase (NCBI ptt file) 0.73 SO0097 hutU urocanate hydratase (NCBI ptt file) 0.77 1
Shewanella loihica PV-4 0.66 Shew_3756 histidine ammonia-lyase (RefSeq) 0.74 Shew_3757 urocanate hydratase (RefSeq) 0.90 1
Alteromonas macleodii MIT1002 0.64 MIT1002_00905 Histidine ammonia-lyase 0.76 MIT1002_00904 Urocanate hydratase low > 70
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1432 histidine ammonia-lyase (EC 4.3.1.3) 0.79 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) 0.34 9
Rhodospirillum rubrum S1H 0.54 Rru_A1301 Histidine ammonia-lyase (NCBI) 0.74 Rru_A1304 Urocanate hydratase (NCBI) low > 58
Azospirillum sp. SherDot2 0.54 MPMX19_04940 Histidine ammonia-lyase 0.75 MPMX19_04936 Urocanate hydratase low > 112
Agrobacterium fabrum C58 0.49 Atu3933 histidine ammonia-lyase 0.76 Atu3931 urocanate hydratase 0.46 4
Rhizobium sp. OAE497 0.49 ABIE40_RS20355 histidine ammonia-lyase 0.76 ABIE40_RS20360 urocanate hydratase 0.88 3
Caulobacter crescentus NA1000 0.48 CCNA_01010 histidine ammonia-lyase 0.74 CCNA_01008 urocanate hydratase low > 66
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_3963 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.75 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) 0.62 2
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01010 histidine ammonia-lyase 0.74 CCNA_01008 urocanate hydratase 0.83 10
Sinorhizobium meliloti 1021 0.48 SM_b21165 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.77 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) 0.75 5
Phaeobacter inhibens DSM 17395 0.46 PGA1_c36340 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.74 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) 0.81 3
Shewanella amazonensis SB2B 0.38 Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) 0.81 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_04560 histidine ammonia-lyase 0.58 CA264_08875 urocanate hydratase 0.31 61
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2690 histidine ammonia-lyase (NCBI ptt file) 0.26 BT2694 putative urocanate hydratase (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS00340 histidine ammonia-lyase 0.27 HMPREF1181_RS00360 urocanate hydratase 0.45 4
Lysobacter sp. OAE881 0.28 ABIE51_RS13345 aromatic amino acid lyase 0.81 ABIE51_RS06295 urocanate hydratase 0.72 35
Rhodanobacter denitrificans MT42 0.28 LRK55_RS01065 aromatic amino acid lyase 0.81 LRK55_RS16070 urocanate hydratase low > 63
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_05610 hutH histidine ammonia-lyase 0.80 OKGIIK_08350 hutU urocanate hydratase low > 52

Not shown: 22 genomes with orthologs for RR42_RS14640 only; 4 genomes with orthologs for RR42_RS14645 only