| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS14410 | | leucine/isoleucine/valine transporter ATP-binding subunit | 1.0 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | 0.68 | 2 |
| Herbaspirillum seropedicae SmR1 | 0.78 | HSERO_RS08285 | | amino acid ABC transporter ATP-binding protein | 0.81 | HSERO_RS08270 | | amino acid ABC transporter substrate-binding protein | 0.47 | 21 |
| Castellaniella sp019104865 MT123 | 0.75 | ABCV34_RS03630 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.66 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.97 | 18 |
| Pseudomonas sp. BP01 | 0.65 | JOY50_RS24200 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.56 | JOY50_RS24215 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | 37 |
| Pseudomonas fluorescens GW456-L13 | 0.65 | PfGW456L13_4610 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.57 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.41 | 3 |
| Pseudomonas aeruginosa PA14 | 0.65 | IKLFDK_04915 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.59 | IKLFDK_04930 | | Leucine- isoleucine- valine- threonine- and alanine-binding protein | low | > 101 |
| Pseudomonas sp. DMC3 | 0.65 | GFF2183 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.58 | GFF2186 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | low | > 89 |
| Pseudomonas putida KT2440 | 0.65 | PP_1138 | | branched chain amino acid transporter - ATP binding subunit | 0.55 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.62 | 3 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_17110 | | ABC transporter ATP-binding protein | 0.58 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.57 | 4 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_05335 | | ABC transporter ATP-binding protein | 0.58 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.71 | 4 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_00537 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.56 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.76 | 3 |
| Pseudomonas sp. SVBP6 | 0.65 | COO64_RS17095 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.56 | COO64_RS17115 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.65 | Pf1N1B4_3215 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.58 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_2925 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) | 0.57 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.65 | 1 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS00510 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.51 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.90 | 3 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_4287 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.50 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.82 | 3 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS19240 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS26335 | | ABC transporter ATP-binding protein | 0.50 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | low | > 92 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_00975 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.49 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 86 |
| Rahnella sp. WP5 | 0.64 | EX31_RS14790 | | ABC transporter ATP-binding protein | 0.50 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 89 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS20715 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.52 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | low | > 71 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS00675 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.53 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.44 | 4 |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_04331 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.49 | MPMX20_04334 | | Leucine-specific-binding protein | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.64 | GFF551 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.50 | GFF548 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 78 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_3058 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.56 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.85 | 3 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS19760 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 55 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.57 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.57 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas simiae WCS417 | 0.64 | PS417_06600 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.55 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | low | > 88 |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_08550 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Escherichia coli BW25113 | 0.63 | b3455 | livG | leucine/isoleucine/valine transporter subunit (NCBI) | 0.50 | b3458 | livK | leucine transporter subunit (NCBI) | 0.87 | 5 |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_14525 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.63 | OHPLBJKB_00248 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.50 | OHPLBJKB_00245 | | Leucine-specific-binding protein | low | > 73 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_20385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 86 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_11385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_16755 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.56 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.69 | 3 |
| Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.56 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.63 | 3 |
| Pantoea sp. MT58 | 0.63 | IAI47_01580 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.23 | 14 |
| Escherichia coli ECRC62 | 0.63 | BNILDI_02955 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | BNILDI_02970 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Escherichia coli ECOR38 | 0.63 | HEPCGN_15575 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 87 |
| Escherichia fergusonii Becca | 0.63 | EFB2_00367 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.50 | EFB2_00364 | | Leucine-specific-binding protein | low | > 86 |
| Escherichia coli ECRC101 | 0.63 | MCAODC_07285 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 87 |
| Escherichia coli BL21 | 0.63 | ECD_03304 | | branched-chain amino acid ABC transporter ATPase | 0.50 | ECD_03309 | | branched-chain amino acid ABC transporter periplasmic binding protein | low | > 61 |
| Pseudomonas sp. S08-1 | 0.63 | OH686_04620 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivG | 0.57 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | 0.94 | 3 |
| Pseudomonas stutzeri RCH2 | 0.63 | Psest_1309 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.58 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.32 | 3 |
| Erwinia amylovora T8 | 0.63 | OLJFJH_04340 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.50 | OLJFJH_04355 | | leucine ABC transporter subunit substrate-binding protein LivK | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.54 | TX73_019720 | | ABC transporter ATP-binding protein | 0.37 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.78 | 1 |
| Rhodospirillum rubrum S1H | 0.53 | Rru_A1749 | | ABC transporter component (NCBI) | 0.40 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | 0.71 | 5 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS08245 | | L-proline and D-alanine ABC transporter, ATPase component 1 (from data) | 0.37 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | 0.56 | 5 |
| Sinorhizobium meliloti 1021 | 0.52 | SMc01949 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein | 0.39 | SMc00078 | | Leu/Ile/Val-binding protein | low | > 103 |
| Xanthobacter sp. DMC5 | 0.52 | GFF734 | | putative amino-acid import ATP-binding protein YxeO | 0.38 | GFF730 | | Leu/Ile/Val-binding protein | — | — |
| Agrobacterium fabrum C58 | 0.52 | Atu2425 | | ABC transporter, nucleotide binding/ATPase protein | 0.36 | Atu2276 | | ABC transporter, substrate binding protein (branched chain amino acid) | low | > 89 |
| Magnetospirillum magneticum AMB-1 | 0.51 | AMB_RS09125 | | ABC transporter ATP-binding protein | 0.40 | AMB_RS15010 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 64 |
| Azospirillum sp. SherDot2 | 0.50 | MPMX19_05498 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.40 | MPMX19_04840 | | Leu/Ile/Val-binding protein | low | > 112 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS14705 | | ABC transporter ATP-binding protein | 0.37 | ABIE40_RS14690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.73 | 8 |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS27570 | | ABC transporter ATP-binding protein | 0.31 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 91 |
Not shown: 2 genomes with orthologs for RR42_RS14410 only; 6 genomes with orthologs for RR42_RS14425 only