Conservation of cofitness between Psyr_4835 and Psyr_4932 in Pseudomonas syringae pv. syringae B728a

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4835 imidazolonepropionase 1.0 Psyr_4932 agmatine deiminase 0.44 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4835 imidazolonepropionase 1.00 Psyr_4932 agmatine deiminase low > 86
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 AO353_11915 agmatine deiminase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.89 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) low > 103
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.89 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) low > 104
Pseudomonas fluorescens SBW25 0.83 PFLU_RS01815 imidazolonepropionase 0.89 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS01815 imidazolonepropionase 0.89 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas simiae WCS417 0.83 PS417_01760 imidazolonepropionase 0.89 PS417_01340 agmatine deiminase low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas sp. RS175 0.82 PFR28_04972 Imidazolonepropionase 0.88 PFR28_04897 Agmatine deiminase low > 88
Pseudomonas putida KT2440 0.81 PP_5030 Imidazolonepropionase 0.87 PP_0266 Agmatine deiminase low > 96
Rahnella sp. WP5 0.62 EX31_RS06720 imidazolonepropionase 0.50 EX31_RS21180 agmatine deiminase 0.39 4
Azospirillum brasilense Sp245 0.61 AZOBR_RS21725 imidazolonepropionase 0.37 AZOBR_RS08825 agmatine deiminase low > 97
Dickeya dianthicola ME23 0.60 DZA65_RS15940 imidazolonepropionase 0.53 DZA65_RS21565 agmatine deiminase low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS15060 imidazolonepropionase 0.51 DDA3937_RS00855 agmatine deiminase low > 74
Dickeya dianthicola 67-19 0.60 HGI48_RS15140 imidazolonepropionase 0.52 HGI48_RS20520 agmatine deiminase low > 71
Serratia liquefaciens MT49 0.59 IAI46_10610 imidazolonepropionase 0.22 IAI46_12735 agmatine deiminase family protein low > 86
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7) 0.27 B158DRAFT_1812 Peptidylarginine deiminase and related enzymes low > 40
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS16230 imidazolonepropionase 0.23 LRK54_RS00335 agmatine deiminase family protein — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS07870 imidazolonepropionase 0.25 ABZR86_RS02780 agmatine/peptidylarginine deiminase — —
Rhodanobacter denitrificans MT42 0.55 LRK55_RS15980 imidazolonepropionase 0.23 LRK55_RS00025 agmatine deiminase family protein — —
Variovorax sp. SCN45 0.54 GFF6402 Imidazolonepropionase (EC 3.5.2.7) 0.25 GFF36 Similar to Agmatine deiminase low > 127
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_08425 hutI imidazolonepropionase 0.23 OKGIIK_06975 Agmatine deiminase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS06605 imidazolonepropionase 0.23 A4249_RS11140 agmatine deiminase family protein — —
Azospirillum sp. SherDot2 0.52 MPMX19_04938 Imidazolonepropionase 0.39 MPMX19_04878 Agmatine deiminase low > 112
Shewanella sp. ANA-3 0.51 Shewana3_0098 imidazolonepropionase (RefSeq) 0.54 Shewana3_3465 agmatine deiminase (RefSeq) low > 73
Lysobacter sp. OAE881 0.50 ABIE51_RS06250 imidazolonepropionase 0.25 ABIE51_RS09325 agmatine deiminase family protein — —
Shewanella oneidensis MR-1 0.50 SO0095 hutI Imidazolonepropionase (EC 3.5.2.7) (from data) 0.54 SO_0887 agmatine deiminase (RefSeq) 0.32 43
Phaeobacter inhibens DSM 17395 0.50 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.19 PGA1_c26490 putative agmatine deiminase low > 62
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01011 imidazolonepropionase 0.24 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase — —
Caulobacter crescentus NA1000 0.49 CCNA_01011 imidazolonepropionase 0.24 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase — —
Shewanella amazonensis SB2B 0.49 Sama_0080 imidazolonepropionase (RefSeq) 0.55 Sama_2521 agmatine deiminase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.47 OH686_16735 imidazolonepropionase 0.80 OH686_11505 agmatine deiminase low > 80
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.20 Ga0059261_1981 Peptidylarginine deiminase and related enzymes — —
Alteromonas macleodii MIT1002 0.46 MIT1002_00902 Imidazolonepropionase 0.15 MIT1002_03760 Putative agmatine deiminase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) 0.23 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS11585 imidazolonepropionase 0.23 HMPREF1078_RS01165 agmatine deiminase family protein low > 61
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS00350 imidazolonepropionase 0.25 HMPREF1181_RS14245 agmatine deiminase family protein low > 56
Bacteroides ovatus ATCC 8483 0.31 BACOVA_00993 imidazolonepropionase 0.23 BACOVA_02593 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.30 BT2692 imidazolonepropionase (NCBI ptt file) 0.21 BT0876 conserved hypothetical protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS02535 imidazolonepropionase 0.20 HMPREF1058_RS04370 agmatine deiminase family protein low > 67
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS01820 imidazolonepropionase 0.20 ABI39_RS16700 agmatine deiminase family protein low > 72

Not shown: 28 genomes with orthologs for Psyr_4835 only; 7 genomes with orthologs for Psyr_4932 only