Conservation of cofitness between Psyr_1655 and Psyr_3224 in Pseudomonas syringae pv. syringae B728a

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1655 TatD-related deoxyribonuclease 1.0 Psyr_3224 Low molecular weight phosphotyrosine protein phosphatase 0.40 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1655 TatD-related deoxyribonuclease 1.00 Psyr_3224 Low molecular weight phosphotyrosine protein phosphatase low > 86
Pseudomonas fluorescens SBW25 0.89 PFLU_RS23020 TatD family hydrolase 0.45 PFLU_RS17940 low molecular weight phosphotyrosine protein phosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS23020 TatD family hydrolase 0.45 PFLU_RS17940 low molecular weight phosphotyrosine protein phosphatase low > 109
Pseudomonas simiae WCS417 0.89 PS417_21405 hydrolase TatD 0.19 PS417_16320 protein tyrosine phosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5960 Putative deoxyribonuclease YcfH 0.20 Pf6N2E2_5936 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_20205 hydrolase TatD 0.20 AO356_20090 protein tyrosine phosphatase low > 104
Pseudomonas sp. RS175 0.89 PFR28_03002 putative metal-dependent hydrolase YcfH 0.19 PFR28_03025 Putative low molecular weight protein-tyrosine-phosphatase low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_01325 hydrolase TatD 0.19 AO353_01435 protein tyrosine phosphatase low > 101
Pseudomonas sp. S08-1 0.86 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH 0.18 OH686_22075 Low molecular weight protein tyrosine phosphatase low > 80
Pseudomonas putida KT2440 0.85 PP_1967 tRNA D-aminoacylase 0.16 PP_1903 putative phosphotyrosine-protein phosphatase low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_1696 hydrolase, TatD family 0.52 Psest_1839 Protein-tyrosine-phosphatase — —
Serratia liquefaciens MT49 0.49 IAI46_09825 metal-dependent hydrolase 0.41 IAI46_08015 protein tyrosine phosphatase low > 86
Dickeya dianthicola ME23 0.49 DZA65_RS13620 metal-dependent hydrolase 0.39 DZA65_RS07090 protein-tyrosine-phosphatase low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS13150 metal-dependent hydrolase 0.39 HGI48_RS06735 protein-tyrosine-phosphatase low > 71
Rahnella sp. WP5 0.49 EX31_RS24470 metal-dependent hydrolase 0.39 EX31_RS02930 protein-tyrosine-phosphatase low > 89
Dickeya dadantii 3937 0.49 DDA3937_RS13085 metal-dependent hydrolase 0.40 DDA3937_RS06715 protein-tyrosine-phosphatase low > 74
Erwinia tracheiphila SCR3 0.48 LU632_RS14785 metal-dependent hydrolase 0.36 LU632_RS08775 protein tyrosine phosphatase low > 74
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS10885 DNAase 0.36 RR42_RS33255 protein-tyrosine phosphatase low > 128
Pectobacterium carotovorum WPP14 0.47 HER17_RS08685 metal-dependent hydrolase 0.43 HER17_RS14605 protein-tyrosine-phosphatase low > 75
Pantoea sp. MT58 0.47 IAI47_12035 metal-dependent hydrolase 0.37 IAI47_06935 protein tyrosine phosphatase — —
Klebsiella michiganensis M5al 0.47 BWI76_RS11125 metal-dependent hydrolase 0.36 BWI76_RS19085 protein-tyrosine-phosphatase low > 92
Ralstonia solanacearum GMI1000 0.47 RS_RS09020 TatD family deoxyribonuclease 0.38 RS_RS22040 protein-tyrosine-phosphatase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16465 TatD family deoxyribonuclease 0.38 RPSI07_RS04520 low molecular weight phosphotyrosine protein phosphatase low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3382 Putative deoxyribonuclease YcfH 0.41 GFF3867 Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48) low > 78
Ralstonia solanacearum UW163 0.45 UW163_RS14320 TatD family deoxyribonuclease 0.38 UW163_RS20050 low molecular weight phosphotyrosine protein phosphatase — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01010 TatD family deoxyribonuclease 0.38 RALBFv3_RS19080 low molecular weight phosphotyrosine protein phosphatase low > 76
Acinetobacter radioresistens SK82 0.45 MPMX26_01224 putative metal-dependent hydrolase YcfH 0.35 MPMX26_00048 Low molecular weight protein-tyrosine-phosphatase Ptp low > 36
Escherichia coli ECRC101 0.45 MCAODC_22900 ycfH metal-dependent hydrolase 0.43 MCAODC_20635 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 87
Escherichia coli ECRC100 0.45 OKFHMN_03540 ycfH metal-dependent hydrolase 0.43 OKFHMN_24305 wzb low molecular weight protein-tyrosine-phosphatase Wzb 0.63 38
Escherichia coli ECOR27 0.45 NOLOHH_21070 ycfH metal-dependent hydrolase 0.43 NOLOHH_15635 wzb low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli ECRC62 0.45 BNILDI_19230 ycfH metal-dependent hydrolase 0.43 BNILDI_14545 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 75
Escherichia coli BL21 0.45 ECD_01096 putative DNase 0.43 ECD_01967 colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase — —
Escherichia coli ECRC98 0.45 JDDGAC_07200 ycfH metal-dependent hydrolase 0.43 JDDGAC_28415 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 86
Escherichia coli ECRC102 0.45 NIAGMN_24290 ycfH metal-dependent hydrolase 0.43 NIAGMN_22250 wzb low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS06350 metal-dependent hydrolase 0.43 ECOLIN_RS12135 low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli ECOR38 0.45 HEPCGN_23940 ycfH metal-dependent hydrolase 0.43 HEPCGN_03005 wzb low molecular weight protein-tyrosine-phosphatase Wzb low > 87
Escherichia coli ECRC99 0.45 KEDOAH_24215 ycfH metal-dependent hydrolase 0.43 KEDOAH_03845 wzb low molecular weight protein-tyrosine-phosphatase Wzb — —
Escherichia coli BW25113 0.45 b1100 ycfH predicted metallodependent hydrolase (NCBI) 0.43 b2061 wzb protein-tyrosine phosphatase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH 0.39 OHPLBJKB_02683 Low molecular weight protein-tyrosine-phosphatase Etp low > 73
Escherichia fergusonii Becca 0.45 EFB2_02875 putative metal-dependent hydrolase YcfH 0.43 EFB2_01793 Low molecular weight protein-tyrosine-phosphatase Wzb low > 86
Enterobacter sp. TBS_079 0.45 MPMX20_01780 putative metal-dependent hydrolase YcfH 0.41 MPMX20_03085 Low molecular weight protein-tyrosine-phosphatase Etp low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1829 hydrolase, TatD family 0.39 EX28DRAFT_0494 Protein-tyrosine-phosphatase low > 76
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03960 TatD family hydrolase 0.17 ABCV34_RS05105 low molecular weight protein-tyrosine-phosphatase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00931 TatD DNase family protein 0.34 H281DRAFT_00946 protein-tyrosine phosphatase low > 103
Paraburkholderia graminis OAS925 0.42 ABIE53_002166 TatD DNase family protein 0.36 ABIE53_002182 protein-tyrosine phosphatase — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS21805 TatD family hydrolase 0.33 QEN71_RS08440 low molecular weight protein-tyrosine-phosphatase — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS09640 DNAase 0.34 BPHYT_RS31035 protein-tyrosine-phosphatase — —
Variovorax sp. OAS795 0.41 ABID97_RS16000 TatD family hydrolase 0.31 ABID97_RS23035 low molecular weight protein-tyrosine-phosphatase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4665 Putative deoxyribonuclease YcfH 0.19 GFF123 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) low > 90
Rhodospirillum rubrum S1H 0.39 Rru_A1700 TatD-related deoxyribonuclease (NCBI) 0.17 Rru_A3646 Protein tyrosine phosphatase (NCBI) low > 58
Agrobacterium fabrum C58 0.37 Atu1495 hypothetical protein 0.23 Atu2677 protein tyrosine phosphatase low > 89
Rhizobium sp. OAE497 0.36 ABIE40_RS09480 TatD family hydrolase 0.21 ABIE40_RS18225 low molecular weight protein-tyrosine-phosphatase low > 107
Marinobacter adhaerens HP15 0.31 HP15_3420 hydrolase, TatD family 0.34 HP15_p187g45 protein-tyrosine phosphatase, low molecular weight low > 73
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_1521 tatD Sec-independent protein translocase TatD 0.18 Synpcc7942_0463 protein tyrosine phosphatase low > 38
Mycobacterium tuberculosis H37Rv 0.25 Rv1008 Probable deoxyribonuclease TatD (YJJV protein) 0.21 Rv2234 Phosphotyrosine protein phosphatase PtpA (protein-tyrosine-phosphatase) (PTPase) (LMW phosphatase) low > 58

Not shown: 33 genomes with orthologs for Psyr_1655 only; 6 genomes with orthologs for Psyr_3224 only