Conservation of cofitness between Psyr_2193 and Psyr_0544 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2193 Secretion protein HlyD 1.0 Psyr_0544 hydroxymethylpyrimidine synthase 0.37 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2193 Secretion protein HlyD 1.00 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_24080 hypothetical protein 0.94 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_27560 hypothetical protein 0.95 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Rahnella sp. WP5 0.62 EX31_RS11030 efflux RND transporter periplasmic adaptor subunit 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Enterobacter sp. TBS_079 0.62 MPMX20_02161 Multidrug resistance protein MdtA 0.71 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS07535 efflux RND transporter periplasmic adaptor subunit 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Klebsiella michiganensis M5al 0.61 BWI76_RS05715 RND family efflux transporter MFP subunit 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Pseudomonas putida KT2440 0.59 PP_3301 RND efflux membrane fusion protein 0.91 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_833 Probable Co/Zn/Cd efflux system membrane fusion protein 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Enterobacter asburiae PDN3 0.57 EX28DRAFT_1392 RND family efflux transporter, MFP subunit 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Pantoea sp. MT58 0.57 IAI47_07205 efflux RND transporter periplasmic adaptor subunit 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_31 Probable Co/Zn/Cd efflux system membrane fusion protein 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Dickeya dianthicola 67-19 0.54 HGI48_RS07920 efflux RND transporter periplasmic adaptor subunit 0.71 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS08515 efflux RND transporter periplasmic adaptor subunit 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC low > 75
Ralstonia solanacearum GMI1000 0.54 RS_RS16065 efflux RND transporter periplasmic adaptor subunit 0.72 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Dickeya dadantii 3937 0.54 DDA3937_RS03815 efflux RND transporter periplasmic adaptor subunit 0.73 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.556.1 component of multidrug efflux system 0.74 Xcc-8004.1066.1 hypothetical protein low > 74
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_05877 RND family efflux transporter, MFP subunit 0.75 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS17655 efflux RND transporter periplasmic adaptor subunit 0.72 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Ralstonia solanacearum PSI07 0.53 RPSI07_RS15475 efflux RND transporter periplasmic adaptor subunit 0.72 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Pseudomonas sp. RS175 0.53 PFR28_02360 Multidrug resistance protein MdtA 0.95 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS20905 efflux RND transporter periplasmic adaptor subunit 0.72 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS22040 efflux RND transporter periplasmic adaptor subunit 0.72 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS29320 hemolysin secretion protein D 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS20770 efflux RND transporter periplasmic adaptor subunit 0.76 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC low > 74
Variovorax sp. OAS795 0.50 ABID97_RS27780 efflux RND transporter periplasmic adaptor subunit 0.67 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01865 periplasmic multidrug efflux lipoprotein precursor 0.63 CCNA_02109 thiamine biosynthesis protein thiC low > 67
Caulobacter crescentus NA1000 0.49 CCNA_01865 periplasmic multidrug efflux lipoprotein precursor 0.63 CCNA_02109 thiamine biosynthesis protein thiC low > 66
Agrobacterium fabrum C58 0.40 Atu4218 multidrug efflux protein 0.64 Atu2569 thiamine biosynthesis protein low > 89
Azospirillum sp. SherDot2 0.40 MPMX19_03856 Multidrug resistance protein MdtA 0.63 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Azospirillum brasilense Sp245 0.40 AZOBR_RS32760 hemolysin secretion protein D 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Sinorhizobium meliloti 1021 0.37 SMa1885 membrane efflux protein 0.63 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Pseudomonas simiae WCS417 0.33 PS417_15955 secretion protein HylD 0.96 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS17775 efflux RND transporter periplasmic adaptor subunit 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS17775 efflux RND transporter periplasmic adaptor subunit 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas sp. S08-1 0.31 OH686_23555 hypothetical protein 0.90 OH686_15885 phosphomethylpyrimidine synthase 0.41 23
Rhodopseudomonas palustris CGA009 0.25 TX73_010140 efflux RND transporter periplasmic adaptor subunit 0.63 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4731 RND efflux membrane fusion protein 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4032 Probable Co/Zn/Cd efflux system membrane fusion protein 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 90
Marinobacter adhaerens HP15 0.20 HP15_1119 efflux transporter, RND family, MFP subunit 0.81 HP15_453 thiamine biosynthesis protein thiC low > 73

Not shown: 0 genomes with orthologs for Psyr_2193 only; 53 genomes with orthologs for Psyr_0544 only