Conservation of cofitness between PfGW456L13_1351 and PfGW456L13_4556 in Pseudomonas fluorescens GW456-L13

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_1351 LrgA-associated membrane protein LrgB 1.0 PfGW456L13_4556 ThiJ/PfpI family protein 0.49 3
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2683 LrgA-associated membrane protein LrgB 0.97 Pf1N1B4_3266 ThiJ/PfpI family protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_06515 hypothetical protein 0.96 AO353_17405 glutamine amidotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_15270 hypothetical protein 0.92 AO356_04780 glutamine amidotransferase low > 104
Pseudomonas sp. RS175 0.91 PFR28_03876 Inner membrane protein YohK 0.92 PFR28_00651 Protein/nucleic acid deglycase 2 low > 88
Pseudomonas fluorescens SBW25 0.90 PFLU_RS26700 LrgB family protein 0.21 PFLU_RS17630 type 1 glutamine amidotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS26700 LrgB family protein 0.21 PFLU_RS17630 type 1 glutamine amidotransferase low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4989 LrgA-associated membrane protein LrgB 0.92 Pf6N2E2_2805 ThiJ/PfpI family protein low > 103
Pseudomonas putida KT2440 0.87 PP_4815 putative Membrane protein 0.86 PP_0893 ThiJ/PfpI family protein low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_0637 LrgB-like protein 0.22 Psyr_4763 Peptidase C56, PfpI low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_0637 LrgB-like protein 0.22 Psyr_4763 Peptidase C56, PfpI low > 86
Pseudomonas sp. S08-1 0.73 OH686_09360 LrgA-associated membrane protein LrgB 0.80 OH686_17770 Intracellular protease low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_0505 Putative effector of murein hydrolase 0.84 Psest_3195 intracellular protease, PfpI family low > 67
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02851 TIGR00659 family protein 0.71 H281DRAFT_05074 protease I — —
Paraburkholderia graminis OAS925 0.37 ABIE53_005942 putative murein hydrolase (TIGR00659 family) 0.71 ABIE53_001799 protease I low > 113
Marinobacter adhaerens HP15 0.37 HP15_2943 LrgB family protein 0.71 HP15_874 intracellular protease, PfpI family low > 73
Ralstonia solanacearum UW163 0.35 UW163_RS08115 LrgB family protein 0.75 UW163_RS02370 glutamine amidotransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05510 LrgB family protein 0.75 RALBFv3_RS11210 glutamine amidotransferase low > 76
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS26565 membrane protein 0.71 BPHYT_RS07925 glutamine amidotransferase — —
Variovorax sp. OAS795 0.34 ABID97_RS17375 LrgB family protein 0.22 ABID97_RS01125 type 1 glutamine amidotransferase domain-containing protein — —
Ralstonia solanacearum GMI1000 0.33 RS_RS13370 LrgB family protein 0.75 RS_RS02060 protease low > 80
Rhodospirillum rubrum S1H 0.33 Rru_A2427 LrgB-like protein (NCBI) 0.58 Rru_A0902 Peptidase C56, PfpI (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS14495 membrane protein 0.73 HSERO_RS15410 glutamine amidotransferase low > 78
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS17325 membrane protein 0.77 RR42_RS02120 glutamine amidotransferase low > 128
Variovorax sp. SCN45 0.32 GFF436 LrgA-associated membrane protein LrgB 0.67 GFF2237 Intracellular protease low > 127
Ralstonia solanacearum PSI07 0.31 RPSI07_RS11790 LrgB family protein 0.76 RPSI07_RS22090 protease low > 81
Escherichia coli ECRC101 0.31 MCAODC_14625 yohK CidB/LrgB family autolysis modulator 0.23 MCAODC_08720 yhbO protein/nucleic acid deglycase low > 87
Escherichia coli BW25113 0.31 b2142 yohK predicted inner membrane protein (NCBI) 0.23 b3153 yhbO orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.31 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator 0.23 KEDOAH_09950 yhbO protein/nucleic acid deglycase — —
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS01160 LrgB family protein 0.74 ABZR87_RS07100 DJ-1/PfpI family protein low > 80
Escherichia fergusonii Becca 0.31 EFB2_01714 Inner membrane protein YohK 0.23 EFB2_00670 Protein/nucleic acid deglycase 2 low > 86
Escherichia coli BL21 0.31 ECD_02071 LrgB family inner membrane protein 0.23 ECD_03020 stress-resistance protein low > 61
Escherichia coli ECRC102 0.31 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator 0.23 NIAGMN_15960 yhbO protein/nucleic acid deglycase — —
Escherichia coli ECOR27 0.31 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator 0.23 NOLOHH_10000 yhbO protein/nucleic acid deglycase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01569 Inner membrane protein YohK 0.23 OHPLBJKB_00547 Protein/nucleic acid deglycase 2 low > 73
Escherichia coli ECRC98 0.31 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator 0.23 JDDGAC_21825 yhbO protein/nucleic acid deglycase low > 86
Escherichia coli ECOR38 0.31 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator 0.24 HEPCGN_17075 yhbO protein/nucleic acid deglycase low > 87
Escherichia coli ECRC62 0.31 BNILDI_14065 yohK CidB/LrgB family autolysis modulator 0.23 BNILDI_01530 yhbO protein/nucleic acid deglycase 0.63 33
Escherichia coli ECRC100 0.31 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator 0.23 OKFHMN_18200 yhbO protein/nucleic acid deglycase low > 80
Klebsiella michiganensis M5al 0.30 BWI76_RS19605 CidB/LrgB family autolysis modulator 0.72 BWI76_RS12515 protease low > 92
Enterobacter sp. TBS_079 0.30 MPMX20_03114 Inner membrane protein YohK 0.73 MPMX20_02447 Putative cysteine protease YraA low > 85
Pantoea sp. MT58 0.29 IAI47_06765 CidB/LrgB family autolysis modulator 0.20 IAI47_16940 type 1 glutamine amidotransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3796 LrgA-associated membrane protein LrgB 0.23 GFF1515 General stress protein 18 — —
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0413 TIGR00659 family protein 0.72 EX28DRAFT_1000 intracellular protease, PfpI family low > 76
Serratia liquefaciens MT49 0.28 IAI46_07945 CidB/LrgB family autolysis modulator 0.72 IAI46_12695 DJ-1/PfpI family protein — —
Rhodopseudomonas palustris CGA009 0.26 TX73_002825 LrgB family protein 0.20 TX73_006675 type 1 glutamine amidotransferase low > 86
Acinetobacter radioresistens SK82 0.20 MPMX26_00599 Holin-like protein CidB 0.20 MPMX26_03027 General stress protein 18 — —
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS28735 LrgB family protein 0.68 QEN71_RS23240 DJ-1/PfpI family protein low > 153
Shewanella oneidensis MR-1 0.13 SO1048 membrane protein, putative (NCBI ptt file) 0.67 SO1378 ThiJ/PfpI family protein (NCBI ptt file) low > 76

Not shown: 24 genomes with orthologs for PfGW456L13_1351 only; 10 genomes with orthologs for PfGW456L13_4556 only